RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 CCND3P30281 292 aaPredicted RBP7.47□□□□□ -1.21
PABPC1-207ENST00000518716 PHKA1P46020 1223 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 HMGCS2P54868 508 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 JAG1P78504 1218 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 PSAPL1Q6NUJ1 521 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 METTL16Q86W50 562 aaKnown RBP7.47□□□□□ -1.21
PABPC1-207ENST00000518716 PLPP7Q8NBV4 271 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 P2RX7Q99572 595 aaKnown RBP7.47□□□□□ -1.21
PABPC1-207ENST00000518716 WDR18Q9BV38 432 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 DENND2AQ9ULE3 1009 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 PCDHGA11Q9Y5H2 935 aa7.47□□□□□ -1.21
PABPC1-207ENST00000518716 MYH13Q9UKX3 1938 aa7.46□□□□□ -1.21
PABPC1-207ENST00000518716 FAM196BA6NMK8 535 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 CAP2P40123 477 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 GP2P55259 537 aaKnown RBP7.46□□□□□ -1.22
PABPC1-207ENST00000518716 BACE1P56817 501 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 PABPC4Q13310 644 aaKnown RBP eCLIP7.46□□□□□ -1.22
PABPC1-207ENST00000518716 CCL14Q16627 93 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 MAP7D1Q3KQU3 841 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 FBXO11Q86XK2 927 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 GPRC5AQ8NFJ5 357 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 MAFAQ8NHW3 353 aaPredicted RBP7.46□□□□□ -1.22
PABPC1-207ENST00000518716 SOCS4Q8WXH5 440 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 CLUAP1Q96AJ1 413 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 HSH2DQ96JZ2 352 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 CEP63Q96MT8 703 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 FAM161BQ96MY7 647 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 IGFLR1Q9H665 355 aa7.46□□□□□ -1.22
PABPC1-207ENST00000518716 USP17L5A8MUK1 530 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 KIAA1324LA8MWY0 1029 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-207ENST00000518716 MAP4K4O95819 1239 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-207ENST00000518716 ADORA1P30542 326 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 MAPK4P31152 587 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 BTDP43251 543 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 EPHA4P54764 986 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 HERVK_113P62684 666 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 SMAD3P84022 425 aaKnown RBP7.45□□□□□ -1.22
PABPC1-207ENST00000518716 TYRO3Q06418 890 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 RASGRF1Q13972 1273 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 SNX17Q15036 470 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 SHHQ15465 462 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 ATP2B3Q16720 1220 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 TBCELQ5QJ74 424 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 C9orf50Q5SZB4 431 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 CCDC102BQ68D86 513 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 ZSCAN29Q8IWY8 852 aaPredicted RBP7.45□□□□□ -1.22
PABPC1-207ENST00000518716 ZMYND15Q9H091 742 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 PORCNQ9H237 461 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 XPO5Q9HAV4 1204 aaKnown RBP eCLIP7.45□□□□□ -1.22
PABPC1-207ENST00000518716 GNL3LQ9NVN8 582 aaKnown RBP7.45□□□□□ -1.22
PABPC1-207ENST00000518716 FLRT1Q9NZU1 646 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 MAST2Q6P0Q8 1798 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 MROH7-TTC4A0A0A0MT08 1334 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 LTBP2Q14767 1821 aa7.45□□□□□ -1.22
PABPC1-207ENST00000518716 RLFQ13129 1914 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 RAD21O60216 631 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 CNMDO75829 334 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 HOXC6P09630 235 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 ZKSCAN1P17029 563 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-207ENST00000518716 ZEB1P37275 1124 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-207ENST00000518716 ERVK-24P63145 666 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 MECOMQ03112 1051 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 PICALMQ13492 652 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 C1orf53Q5VUE5 145 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 GPR142Q7Z601 462 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 ZGPATQ8N5A5 531 aaKnown RBP7.44□□□□□ -1.22
PABPC1-207ENST00000518716 DTWD1Q8N5C7 304 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 TRPV1Q8NER1 839 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 RHPN1Q8TCX5 695 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 LPAR1Q92633 364 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 SENP6Q9GZR1 1112 aaPredicted RBP7.44□□□□□ -1.22
PABPC1-207ENST00000518716 DNAJC18Q9H819 358 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 ZNF232Q9UNY5 417 aa7.44□□□□□ -1.22
PABPC1-207ENST00000518716 SIPA1L1O43166 1804 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 FRMPD3Q5JV73 1810 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 C19orf81C9J6K1 198 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 DNM1LO00429 736 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 ADAMTS4O75173 837 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 IL15P40933 162 aaPredicted RBP7.43□□□□□ -1.22
PABPC1-207ENST00000518716 RGS2P41220 211 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 RTP1P59025 263 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 SHROOM1Q2M3G4 852 aaPredicted RBP7.43□□□□□ -1.22
PABPC1-207ENST00000518716 PLEKHH3Q7Z736 793 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 SLC9A9Q8IVB4 645 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 MYLIPQ8WY64 445 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 NSUN4Q96CB9 384 aaKnown RBP7.43□□□□□ -1.22
PABPC1-207ENST00000518716 APBA2Q99767 749 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 LBHD1Q9BQE6 289 aaPredicted RBP7.43□□□□□ -1.22
PABPC1-207ENST00000518716 COPRSQ9NQ92 184 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 GINM1Q9NU53 330 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 DNAJB12Q9NXW2 375 aaKnown RBP7.43□□□□□ -1.22
PABPC1-207ENST00000518716 DDX20Q9UHI6 824 aaKnown RBP7.43□□□□□ -1.22
PABPC1-207ENST00000518716 HERC5Q9UII4 1024 aaKnown RBP7.43□□□□□ -1.22
PABPC1-207ENST00000518716 ZNF521Q96K83 1311 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 ATAD5Q96QE3 1844 aa7.43□□□□□ -1.22
PABPC1-207ENST00000518716 TMEM265A0A087WTH1 108 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 TRIM43BA6NCK2 446 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 SFI1A8K8P3 1242 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 BACH1O14867 736 aa7.42□□□□□ -1.22
PABPC1-207ENST00000518716 RGS9O75916 674 aaPredicted RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms