RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 C12orf50Q8NA57 414 aaPredicted RBP8.04□□□□□ -1.12
CCDC6-203ENST00000518638 TMEM39AQ9NV64 488 aa8.04□□□□□ -1.12
CCDC6-203ENST00000518638 POLR2AP24928 1970 aaKnown RBP8.03□□□□□ -1.12
CCDC6-203ENST00000518638 PRAMEF22A3QJZ6 481 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 FKTNO75072 461 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 POU4F3Q15319 338 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 FAM161BQ96MY7 647 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 TBC1D32Q96NH3 1257 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 NECAB3Q96P71 396 aaPredicted RBP8.03□□□□□ -1.12
CCDC6-203ENST00000518638 CEP44Q9C0F1 390 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 GGA3Q9NZ52 723 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.03□□□□□ -1.12
CCDC6-203ENST00000518638 LRRC37AA6NMS7 1700 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 ABCC4O15439 1325 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 PITPNM2Q9BZ72 1349 aa8.03□□□□□ -1.12
CCDC6-203ENST00000518638 ADM5C9JUS6 153 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 U2SURPO15042 1029 aaKnown RBP8.02□□□□□ -1.13
CCDC6-203ENST00000518638 SORBS3O60504 671 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 TIAF1O95411 115 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 NTSR2O95665 410 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 ZNF16P17020 682 aaPredicted RBP8.02□□□□□ -1.13
CCDC6-203ENST00000518638 KIF4BQ2VIQ3 1234 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 TBC1D10BQ4KMP7 808 aaPredicted RBP8.02□□□□□ -1.13
CCDC6-203ENST00000518638 DDX46Q7L014 1031 aaKnown RBP8.02□□□□□ -1.13
CCDC6-203ENST00000518638 ZAR1Q86SH2 424 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 SMG8Q8ND04 991 aaKnown RBP8.02□□□□□ -1.13
CCDC6-203ENST00000518638 EYA3Q99504 573 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 SUGCTQ9HAC7 445 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 CYP4F12Q9HCS2 524 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 ZNF609O15014 1411 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 UBN2Q6ZU65 1347 aa8.02□□□□□ -1.13
CCDC6-203ENST00000518638 YDJCA8MPS7 323 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 KRTAP9-7A8MTY7 169 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 PSMD14O00487 310 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 KCNQ3O43525 872 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 HTATSF1O43719 755 aaKnown RBP8.01□□□□□ -1.13
CCDC6-203ENST00000518638 TBC1D8O95759 1140 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 DLGAP3O95886 979 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 CTSBP07858 339 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 MAOBP27338 520 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 NF2P35240 595 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 TM4SF4P48230 202 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 USP11P51784 963 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 SUSD4Q5VX71 490 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 CDCA5Q96FF9 252 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 CORO1BQ9BR76 489 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 UTP14AQ9BVJ6 771 aaKnown RBP8.01□□□□□ -1.13
CCDC6-203ENST00000518638 TMPRSS13Q9BYE2 586 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 MRS2Q9HD23 443 aa8.01□□□□□ -1.13
CCDC6-203ENST00000518638 COL3A1P02461 1466 aaPredicted RBP8□□□□□ -1.13
CCDC6-203ENST00000518638 LAMB2P55268 1798 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 ENC1O14682 589 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 FBXO24O75426 580 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 CTSHP09668 335 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 GPTP24298 496 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 ADMP35318 185 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 INHBEP58166 350 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 TCIRG1Q13488 830 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 GRAPQ13588 217 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 HSP90AB3PQ58FF7 597 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 SLC10A5Q5PT55 438 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 EXOSC6Q5RKV6 272 aaKnown RBP8□□□□□ -1.13
CCDC6-203ENST00000518638 HP1BP3Q5SSJ5 553 aaPredicted RBP8□□□□□ -1.13
CCDC6-203ENST00000518638 KSR1Q8IVT5 923 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 ZNF34Q8IZ26 560 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 GRAPLQ8TC17 118 aaPredicted RBP8□□□□□ -1.13
CCDC6-203ENST00000518638 PNISRQ8TF01 805 aaKnown RBP8□□□□□ -1.13
CCDC6-203ENST00000518638 FBLIM1Q8WUP2 373 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 PRKAG2Q9UGJ0 569 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 TTF2Q9UNY4 1162 aaKnown RBP8□□□□□ -1.13
CCDC6-203ENST00000518638 DUOX1Q9NRD9 1551 aa8□□□□□ -1.13
CCDC6-203ENST00000518638 RBM47A0AV96 593 aaKnown RBP7.99□□□□□ -1.13
CCDC6-203ENST00000518638 ECEL1O95672 775 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 NME2P22392 152 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 PLCL1Q15111 1095 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 TAF7Q15545 349 aaPredicted RBP7.99□□□□□ -1.13
CCDC6-203ENST00000518638 KRTAP19-4Q3LI73 84 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 SV2BQ7L1I2 683 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 SULF2Q8IWU5 870 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 CRELD1Q96HD1 420 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 ERO1AQ96HE7 468 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 YIPF2Q9BWQ6 316 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 VTI1BQ9UEU0 232 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 TRIM17Q9Y577 477 aa7.99□□□□□ -1.13
CCDC6-203ENST00000518638 KDM3BQ7LBC6 1761 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 SHTN1A0MZ66 631 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 FAM170BA6NMN3 283 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 ECE2O60344 883 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 GSTP1P09211 210 aaKnown RBP7.98□□□□□ -1.13
CCDC6-203ENST00000518638 PRKAR2BP31323 418 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 MRPL58Q14197 206 aaKnown RBP7.98□□□□□ -1.13
CCDC6-203ENST00000518638 ARHGEF6Q15052 776 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 DUSP27Q5VZP5 1158 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 PDZD3Q86UT5 571 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 NGEFQ8N5V2 710 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 SLC17A8Q8NDX2 589 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 AGBL3Q8NEM8 1001 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 STK35Q8TDR2 534 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 CFAP53Q96M91 514 aa7.98□□□□□ -1.13
CCDC6-203ENST00000518638 BCL11AQ9H165 835 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms