RNA–Protein interactions for RNA: ENST00000518569.1

VPS13B-207, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-207ENST00000518569 PLEKHG4Q58EX7 1191 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 FYB2Q5VWT5 728 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 MBLAC2Q68D91 279 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 C16orf86Q6ZW13 317 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 ZSWIM9Q86XI8 627 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 IFNL3Q8IZI9 196 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 Q8N1Y9 231 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 NLGN1Q8N2Q7 840 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 NUP43Q8NFH3 380 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 PUM2Q8TB72 1066 aaKnown RBP eCLIP5.45□□□□□ -1.54
VPS13B-207ENST00000518569 PHF20Q9BVI0 1012 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 FANCLQ9NW38 375 aa5.45□□□□□ -1.54
VPS13B-207ENST00000518569 YBX2Q9Y2T7 364 aaKnown RBP5.45□□□□□ -1.54
VPS13B-207ENST00000518569 CADPSQ9ULU8 1353 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 H7BY64 318 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 EFEMP2O95967 443 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 HSD3B2P26439 372 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 CYP4F8P98187 520 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 LSAMPQ13449 338 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 KCNMB1Q16558 191 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 LBX2Q6XYB7 198 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 POU5F2Q8N7G0 328 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 GSTCDQ8NEC7 633 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 DPF3Q92784 378 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 MTA3Q9BTC8 594 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 RNF32Q9H0A6 362 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 SLC6A17Q9H1V8 727 aa5.44□□□□□ -1.54
VPS13B-207ENST00000518569 BLACEA4D250 179 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 SRGAP3O43295 1099 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 PPP1R11O60927 126 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-207ENST00000518569 ASMTLO95671 621 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 LCP1P13796 627 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 ERVFRD-1P60508 538 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 JAG1P78504 1218 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 KIZQ2M2Z5 673 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 KCNT2Q6UVM3 1135 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 KIAA0907Q7Z7F0 614 aaPredicted RBP5.43□□□□□ -1.54
VPS13B-207ENST00000518569 LZTR1Q8N653 840 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 FAM168AQ92567 244 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 INTS4Q96HW7 963 aaKnown RBP5.43□□□□□ -1.54
VPS13B-207ENST00000518569 TNFRSF12AQ9NP84 129 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 GULP1Q9UBP9 304 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 SFMBT1Q9UHJ3 866 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 PCDHA2Q9Y5H9 948 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 X6R8D5 127 aa5.43□□□□□ -1.54
VPS13B-207ENST00000518569 ASXL2Q76L83 1435 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 A0A1W2PQJ5 194 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 MSCO60682 206 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 CLSTN1O94985 981 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 APPP05067 770 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 MSL3P1P0C860 447 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 BCL6P41182 706 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 KIR3DS1Q14943 382 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 ZNF648Q5T619 568 aaPredicted RBP5.42□□□□□ -1.54
VPS13B-207ENST00000518569 MROH9Q5TGP6 573 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 CEP68Q76N32 757 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 IRF2BP1Q8IU81 584 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 RIOX2Q8IUF8 465 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 NETO2Q8NC67 525 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 SLC7A14Q8TBB6 771 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 PLEKHO2Q8TD55 490 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 TMEM169Q96HH4 297 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 FEZ1Q99689 392 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 SLC52A2Q9HAB3 445 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 FAM53CQ9NYF3 392 aa5.42□□□□□ -1.54
VPS13B-207ENST00000518569 CARMIL2Q6F5E8 1435 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-207ENST00000518569 HRKO00198 91 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 WNT9AO14904 365 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 PPP1R12AO14974 1030 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-207ENST00000518569 SMARCA5O60264 1052 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-207ENST00000518569 FUCA1P04066 466 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 MPOP05164 745 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 GLI4P10075 376 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 CBX2Q14781 532 aaPredicted RBP5.41□□□□□ -1.54
VPS13B-207ENST00000518569 NR1I3Q14994 352 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 TAF7LQ5H9L4 462 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 CABP7Q86V35 215 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 NLRP10Q86W26 655 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 SIRT2Q8IXJ6 389 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 TRMT2BQ96GJ1 504 aaKnown RBP5.41□□□□□ -1.54
VPS13B-207ENST00000518569 ALG1Q9BT22 464 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 CDIP1Q9H305 208 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 MARCH2Q9P0N8 246 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 NDOR1Q9UHB4 597 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 PLAAQ9Y263 795 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 RWDD3Q9Y3V2 267 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 TRAF6Q9Y4K3 522 aa5.41□□□□□ -1.54
VPS13B-207ENST00000518569 OR14I1A6ND48 311 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 ZNF503-AS2A6NEH8 195 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.4□□□□□ -1.54
VPS13B-207ENST00000518569 C22orf46C9J442 243 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 ARVCFO00192 962 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 ABLIM1O14639 778 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 RAPGEF3O95398 923 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 CYBBP04839 570 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 DBHP09172 617 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 TMEM62Q0P6H9 643 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 PAK1Q13153 545 aa5.4□□□□□ -1.54
VPS13B-207ENST00000518569 PABPC4Q13310 644 aaKnown RBP eCLIP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms