RNA–Protein interactions for RNA: ENST00000517709.1

MCM4-202, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 842 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-202ENST00000517709 CHD7Q9P2D1 2997 aa13.77□□□□□ -0.2
MCM4-202ENST00000517709 hCG_1642624A0A1W2PR95 340 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 ERICH2A1L162 156 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 DDAH1O94760 285 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 CFBP00751 764 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 SIP14410 1827 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 MCM5P33992 734 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 CDK7P50613 346 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 SART3Q15020 963 aaKnown RBP13.77□□□□□ -0.21
MCM4-202ENST00000517709 UMODL1Q5DID0 1318 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 CASC1Q6TDU7 716 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 CATIPQ7Z7H3 387 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 FAM126BQ8IXS8 530 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 SRBD1Q8N5C6 995 aaKnown RBP13.77□□□□□ -0.21
MCM4-202ENST00000517709 GPKOWQ92917 476 aaPredicted RBP eCLIP13.77□□□□□ -0.21
MCM4-202ENST00000517709 ZFP91Q96JP5 570 aaPredicted RBP13.77□□□□□ -0.21
MCM4-202ENST00000517709 PXMP2Q9NR77 195 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 PNMA2Q9UL42 364 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 MRPL11Q9Y3B7 192 aaKnown RBP13.77□□□□□ -0.21
MCM4-202ENST00000517709 PCDHA1Q9Y5I3 950 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 PRUNE2Q8WUY3 3088 aa13.77□□□□□ -0.21
MCM4-202ENST00000517709 ELP1O95163 1332 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 CNTNAP5Q8WYK1 1306 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 LOC102724159A0A0B4J2E5 919 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
MCM4-202ENST00000517709 KIAA0355O15063 1070 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 RGS20O76081 388 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 PPP2R5BQ15173 497 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 PWP2Q15269 919 aaKnown RBP13.76□□□□□ -0.21
MCM4-202ENST00000517709 IQSEC1Q6DN90 963 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 CCDC62Q6P9F0 684 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 MICU3Q86XE3 530 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 SLC43A3Q8NBI5 491 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 PCSK9Q8NBP7 692 aaKnown RBP13.76□□□□□ -0.21
MCM4-202ENST00000517709 OR6J1Q8NGC5 347 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 GLT1D1Q96MS3 346 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 RMDN3Q96TC7 470 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 SPZ1Q9BXG8 430 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 BRPF3Q9ULD4 1205 aa13.76□□□□□ -0.21
MCM4-202ENST00000517709 FRMPD4Q14CM0 1322 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 ARVCFO00192 962 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 EXOSC10Q01780 885 aaKnown RBP13.75□□□□□ -0.21
MCM4-202ENST00000517709 ARHGAP1Q07960 439 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 SHHQ15465 462 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 LY6KQ17RY6 165 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 NFXL1Q6ZNB6 911 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 SEPT14Q6ZU15 432 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 Q7L0L9 218 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 TMEM87BQ96K49 555 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 PDCD2LQ9BRP1 358 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 SPC25Q9HBM1 224 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 UNC80Q8N2C7 3258 aa13.75□□□□□ -0.21
MCM4-202ENST00000517709 PNMA6FA0A0J9YX94 578 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 SORBS3O60504 671 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 B4GALT4O60513 344 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 CD4P01730 458 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 LIFRP42702 1097 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 PURAQ00577 322 aaKnown RBP13.74□□□□□ -0.21
MCM4-202ENST00000517709 ITGA7Q13683 1181 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 PGM5Q15124 567 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 APOA5Q6Q788 366 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 TMTC3Q6ZXV5 915 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 SGMS1Q86VZ5 419 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 MCF2L2Q86YR7 1114 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 TET1Q8NFU7 2136 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 NSUN6Q8TEA1 469 aaKnown RBP13.74□□□□□ -0.21
MCM4-202ENST00000517709 SCFD2Q8WU76 684 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 KCNB2Q92953 911 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 TOX2Q96NM4 488 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 NEK1Q96PY6 1258 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 LBHD1Q9BQE6 289 aaPredicted RBP13.74□□□□□ -0.21
MCM4-202ENST00000517709 MTA3Q9BTC8 594 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 PPP1R12CQ9BZL4 782 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 AP5M1Q9H0R1 490 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 PRKAG2Q9UGJ0 569 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 Q9Y3F1 56 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 WDR81Q562E7 1941 aa13.74□□□□□ -0.21
MCM4-202ENST00000517709 CCDC69A6NI79 296 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 NR3C2P08235 984 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 MYL3P08590 195 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 TXNP10599 105 aaKnown RBP13.73□□□□□ -0.21
MCM4-202ENST00000517709 LRIT3Q3SXY7 679 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 TSGA10IPQ3SY00 556 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 ARHGEF16Q5VV41 709 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 TYW1BQ6NUM6 668 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 FCHSD1Q86WN1 690 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 CTCFLQ8NI51 663 aaPredicted RBP13.73□□□□□ -0.21
MCM4-202ENST00000517709 VTI1AQ96AJ9 217 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 MAP3K14Q99558 947 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 TRPV6Q9H1D0 765 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 BCAS3Q9H6U6 928 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 TRMT13Q9NUP7 481 aaKnown RBP13.73□□□□□ -0.21
MCM4-202ENST00000517709 TMEM39AQ9NV64 488 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 TELO2Q9Y4R8 837 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 SNX14Q9Y5W7 946 aa13.73□□□□□ -0.21
MCM4-202ENST00000517709 MMP3P08254 477 aa13.72□□□□□ -0.21
MCM4-202ENST00000517709 MYCLP12524 364 aaPredicted RBP13.72□□□□□ -0.21
MCM4-202ENST00000517709 HSPA4P34932 840 aa13.72□□□□□ -0.21
MCM4-202ENST00000517709 MRPS9P82933 396 aaKnown RBP13.72□□□□□ -0.21
MCM4-202ENST00000517709 SP2Q02086 613 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms