RNA–Protein interactions for RNA: ENST00000517599.5

NDRG1-204, Transcript of N-myc downstream regulated 1, humanhuman

TSL 2

Gene NDRG1, Length 2,918 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDRG1-204ENST00000517599 MYMKA6NI61 221 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 PNMA6AP0CW24 399 aaPredicted RBP13.51□□□□□ -0.25
NDRG1-204ENST00000517599 SRGNP10124 158 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 TRIM21P19474 475 aaKnown RBP13.51□□□□□ -0.25
NDRG1-204ENST00000517599 TBC1D8BQ0IIM8 1120 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 TRIM14Q14142 442 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 BMS1Q14692 1282 aaKnown RBP13.51□□□□□ -0.25
NDRG1-204ENST00000517599 WDR59Q6PJI9 974 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 ZBTB9Q96C00 473 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 PNMA5Q96PV4 448 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 DBNDD1Q9H9R9 158 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 SWAP70Q9UH65 585 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 GUCA1BQ9UMX6 200 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 REXO2Q9Y3B8 237 aaKnown RBP13.51□□□□□ -0.25
NDRG1-204ENST00000517599 IGKV6D-41A0A0C4DH26 115 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L10C9JJH3 530 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 NDUFA10O95299 355 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 SNHG28P0DPA3 235 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 IDEP14735 1019 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 HOXA7P31268 230 aaPredicted RBP13.51□□□□□ -0.25
NDRG1-204ENST00000517599 HSPA1LP34931 641 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 PPP1R2P41236 205 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 PSEN1P49768 467 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 ZNF543Q08ER8 600 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 RAD51AP2Q09MP3 1159 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 SV2BQ7L1I2 683 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 KCNK18Q7Z418 384 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 CCDC47Q96A33 483 aaKnown RBP13.51□□□□□ -0.25
NDRG1-204ENST00000517599 PARD6BQ9BYG5 372 aa13.51□□□□□ -0.25
NDRG1-204ENST00000517599 MTIF2P46199 727 aaKnown RBP13.5□□□□□ -0.25
NDRG1-204ENST00000517599 AMPD3Q01432 767 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 APOBEC3HQ6NTF7 200 aaKnown RBP13.5□□□□□ -0.25
NDRG1-204ENST00000517599 GPIHBP1Q8IV16 184 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 CDK5RAP3Q96JB5 506 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 PCMTD1Q96MG8 357 aaPredicted RBP13.5□□□□□ -0.25
NDRG1-204ENST00000517599 SEMA6BQ9H3T3 888 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 CTAGE9A4FU28 777 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 RASSF10A6NK89 507 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 ZRANB2O95218 330 aaKnown RBP eCLIP13.5□□□□□ -0.25
NDRG1-204ENST00000517599 DNM2P50570 870 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 CHMP4BP1P59074 171 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 PPP1R18Q6NYC8 613 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 KIAA0825Q8IV33 1275 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 GPR161Q8N6U8 529 aaKnown RBP13.5□□□□□ -0.25
NDRG1-204ENST00000517599 GLIS3Q8NEA6 775 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 SNX29Q8TEQ0 813 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 LARP4BQ92615 738 aaKnown RBP13.5□□□□□ -0.25
NDRG1-204ENST00000517599 TRERF1Q96PN7 1200 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 NOC4LQ9BVI4 516 aaKnown RBP13.5□□□□□ -0.25
NDRG1-204ENST00000517599 CDC23Q9UJX2 597 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 GREB1LQ9C091 1923 aaPredicted RBP13.5□□□□□ -0.25
NDRG1-204ENST00000517599 PNMA6FA0A0J9YX94 578 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 A0A1W2PQC6 194 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 ZNF219Q9P2Y4 722 aaPredicted RBP13.5□□□□□ -0.25
NDRG1-204ENST00000517599 CAPN11Q9UMQ6 739 aa13.5□□□□□ -0.25
NDRG1-204ENST00000517599 ADAMTSL1Q8N6G6 1762 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 NOP2P46087 812 aaKnown RBP13.49□□□□□ -0.25
NDRG1-204ENST00000517599 LRRC41Q15345 812 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 ECM1Q16610 540 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 NOC3LQ8WTT2 800 aaKnown RBP13.49□□□□□ -0.25
NDRG1-204ENST00000517599 GOLGA1Q92805 767 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 DNAJC7Q99615 494 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 BICDL2A1A5D9 508 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L15C9J2P7 530 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L13C9JLJ4 530 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L11C9JVI0 530 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L18D6R9N7 530 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L22D6RA61 530 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L17D6RBQ6 530 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L19D6RCP7 530 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L20D6RJB6 530 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 NPR1P16066 1061 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 PLA2G4AP47712 749 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L24Q0WX57 530 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 TMEM266Q2M3C6 531 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 TSR1Q2NL82 804 aaKnown RBP13.49□□□□□ -0.25
NDRG1-204ENST00000517599 MIIPQ5JXC2 388 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 CNNM4Q6P4Q7 775 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 USP17L6PQ6QN14 398 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 KRT27Q7Z3Y8 459 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 TEKT1Q969V4 418 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 DNAJC18Q9H819 358 aa13.49□□□□□ -0.25
NDRG1-204ENST00000517599 ENC1O14682 589 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 SASH3O75995 380 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 FXR2P51116 673 aaKnown RBP eCLIP13.48□□□□□ -0.25
NDRG1-204ENST00000517599 MSL1Q68DK7 614 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 COL23A1Q86Y22 540 aaPredicted RBP13.48□□□□□ -0.25
NDRG1-204ENST00000517599 RABGGTAQ92696 567 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 ZNF622Q969S3 477 aaKnown RBP eCLIP13.48□□□□□ -0.25
NDRG1-204ENST00000517599 RIC8AQ9NPQ8 531 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 MARCH6O60337 910 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 ALDH1B1P30837 517 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 RBM5P52756 815 aaKnown RBP eCLIP13.48□□□□□ -0.252e-7■■□□□ 12.4
NDRG1-204ENST00000517599 COBLL1Q53SF7 1204 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 KRT79Q5XKE5 535 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 CC2D1AQ6P1N0 951 aaPredicted RBP13.48□□□□□ -0.25
NDRG1-204ENST00000517599 NLGN1Q8N2Q7 840 aa13.48□□□□□ -0.25
NDRG1-204ENST00000517599 DDX12PQ92771 950 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms