RNA–Protein interactions for RNA: ENST00000517533.5

CTNNA1-202, Transcript of catenin alpha 1, humanhuman

TSL 3

Gene CTNNA1, Length 579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-202ENST00000517533 ZDHHC13Q8IUH4 622 aa7.38□□□□□ -1.23
CTNNA1-202ENST00000517533 MAGEB10Q96LZ2 347 aaPredicted RBP7.38□□□□□ -1.23
CTNNA1-202ENST00000517533 MKNK2Q9HBH9 465 aa7.38□□□□□ -1.23
CTNNA1-202ENST00000517533 ATP13A1Q9HD20 1204 aa7.38□□□□□ -1.23
CTNNA1-202ENST00000517533 GNL3LQ9NVN8 582 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-202ENST00000517533 ZC3H7BQ9UGR2 993 aaKnown RBP7.38□□□□□ -1.23
CTNNA1-202ENST00000517533 ALG1L2C9J202 215 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 RNF225M0QZC1 329 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 ARVCFO00192 962 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 MEFVO15553 781 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 PLIN1O60240 522 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 KRT18P05783 430 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 CKMP06732 381 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 HOXA10P31260 410 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 SEPHS1P49903 392 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 GPR85P60893 370 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 GUCY1A3Q02108 690 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 TEKQ02763 1124 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 STRN3Q13033 797 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 OS9Q13438 667 aaPredicted RBP7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 DHX8Q14562 1220 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 NKAPLQ5M9Q1 402 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 CPNE8Q86YQ8 564 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 OSBPL1AQ9BXW6 950 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 TRIT1Q9H3H1 467 aaKnown RBP7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 GPR27Q9NS67 375 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 RNF112Q9ULX5 631 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 ZNF281Q9Y2X9 895 aa7.37□□□□□ -1.23
CTNNA1-202ENST00000517533 WDHD1O75717 1129 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 GLRX3O76003 335 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 PMLP29590 882 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 LTBRP36941 435 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 NOP2P46087 812 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 ID4P47928 161 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 NEK4P51957 841 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 RSPO4Q2I0M5 234 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 LONRF3Q496Y0 759 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 CT47A1Q5JQC4 288 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 ZCCHC8Q6NZY4 707 aaKnown RBP7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 LBX2Q6XYB7 198 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 THAP5Q7Z6K1 395 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 PPM1KQ8N3J5 372 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 PCDH19Q8TAB3 1148 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 PTCHD1Q96NR3 888 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 ARPC5LQ9BPX5 153 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 CDIP1Q9H305 208 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 BSDC1Q9NW68 430 aaPredicted RBP7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 EBF1Q9UH73 591 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 DUSP13Q9UII6 198 aa7.36□□□□□ -1.23
CTNNA1-202ENST00000517533 ZNF891A8MT65 544 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 AQP7O14520 342 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 KATNA1O75449 491 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 PROCP04070 461 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 CD96P40200 585 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 RAB27AP51159 221 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 CLCN7P51798 805 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 PCBP3P57721 371 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 FOXD4Q12950 439 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 SAFB2Q14151 953 aaKnown RBP eCLIP7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 CFAP100Q494V2 611 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 PIK3R6Q5UE93 754 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 EEF1DP3Q658K8 133 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 E4F1Q66K89 784 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 PPP4R4Q6NUP7 873 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 RSPO2Q6UXX9 243 aaPredicted RBP7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 DDX46Q7L014 1031 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 CREG2Q8IUH2 290 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 DPF3Q92784 378 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 DIO2Q92813 273 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 MMP19Q99542 508 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 CDADC1Q9BWV3 514 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 ATG3Q9NT62 314 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 ERVK13-1Q9NX77 482 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 MCM8Q9UJA3 840 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 COQ6Q9Y2Z9 468 aa7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 LAS1LQ9Y4W2 734 aaKnown RBP7.35□□□□□ -1.23
CTNNA1-202ENST00000517533 FAM181BA6NEQ2 426 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 HMGB1P1B2RPK0 211 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 PPP1R11O60927 126 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 H2AFB1P0C5Y9 115 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 H2AFB2P0C5Z0 115 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 ATF3P18847 181 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 GUCY2FP51841 1108 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 HDAC1Q13547 482 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 RNF111Q6ZNA4 994 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 MTDHQ86UE4 582 aaKnown RBP7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 IFNL3Q8IZI9 196 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 NXPE1Q8N323 547 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 SAMD3Q8N6K7 520 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 IGSF22Q8N9C0 903 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 PUM2Q8TB72 1066 aaKnown RBP eCLIP7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 NETO1Q8TDF5 533 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 METTL22Q9BUU2 404 aaPredicted RBP7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 ASPSCR1Q9BZE9 553 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 TRIM8Q9BZR9 551 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 SAMD15Q9P1V8 674 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 STK17AQ9UEE5 414 aa7.34□□□□□ -1.23
CTNNA1-202ENST00000517533 PHLDB1Q86UU1 1377 aa7.33□□□□□ -1.24
CTNNA1-202ENST00000517533 NPHP3-ACAD11A0A0J9YXS1 232 aa7.33□□□□□ -1.24
CTNNA1-202ENST00000517533 TRAF5O00463 557 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms