RNA–Protein interactions for RNA: ENST00000516850.1

RNU6-1088P-201, Transcript of RNA, U6 small nuclear 1088, pseudogene, humanhuman

BASIC

Gene RNU6-1088P, Length 104 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1088P-201ENST00000516850 BTG4Q9NY30 223 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 MARCH2Q9P0N8 246 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 KIAA1522Q9P206 1035 aaPredicted RBP4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 APEX2Q9UBZ4 518 aa4.7□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SMARCA5O60264 1052 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 FBLN1P23142 703 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ERCC5P28715 1186 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 MC3RP41968 323 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CACNB2Q08289 660 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 LARP1BQ659C4 914 aaKnown RBP4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 GTF2IRD2BQ6EKJ0 949 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 B3GNT8Q7Z7M8 397 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 GTF2IRD2Q86UP8 949 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 TRIM59Q8IWR1 403 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 TP53I13Q8NBR0 393 aaPredicted RBP4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SMARCC2Q8TAQ2 1214 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 COPS5Q92905 334 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 DDX11Q96FC9 970 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 MTA3Q9BTC8 594 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 BCAS3Q9H6U6 928 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 PCDH18Q9HCL0 1135 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ACTR10Q9NZ32 417 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 MRVI1Q9Y6F6 885 aa4.69□□□□□ -1.66
RNU6-1088P-201ENST00000516850 MYO1BO43795 1136 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 PPP1R11O60927 126 aaPredicted RBP4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 DDAH1O94760 285 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 PLA2G1BP04054 148 aaKnown RBP4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 HOXC12P31275 282 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 GTF2A2P52657 109 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 PLP2Q04941 152 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 NT5DC1Q5TFE4 455 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 LIPIQ6XZB0 460 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SAPCD2Q86UD0 394 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CPA5Q8WXQ8 436 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ADAM7Q9H2U9 754 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 NKX2-4Q9H2Z4 354 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 NTMQ9P121 344 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 PLA2G2DQ9UNK4 145 aa4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 R3HCC1Q9Y3T6 440 aaKnown RBP4.68□□□□□ -1.66
RNU6-1088P-201ENST00000516850 A0A1B0GTL3 188 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SH3D21A4FU49 640 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 UNCXA6NJT0 531 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 C22orf46C9J442 243 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SMAD7O15105 426 aaKnown RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 THBDP07204 575 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SNRPB2P08579 225 aaKnown RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CYP2C8P10632 490 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 RPL11P62913 178 aaKnown RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 HTRA3P83110 453 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 VWA3BQ502W6 1294 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 UBXN11Q5T124 520 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 E4F1Q66K89 784 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 C6orf15Q6UXA7 325 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 PRRT2Q7Z6L0 340 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ZC3H18Q86VM9 953 aaKnown RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 FAM178BQ8IXR5 827 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ADGRG2Q8IZP9 1017 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ZNF513Q8N8E2 541 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ZNF526Q8TF50 670 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SEC14L1Q92503 715 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 DIO2Q92813 273 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ZBTB8AQ96BR9 441 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 TRMT2BQ96GJ1 504 aaKnown RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CCDC140Q96MF4 163 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SPATA25Q9BR10 227 aa4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 TIMM13Q9Y5L4 95 aaPredicted RBP4.67□□□□□ -1.66
RNU6-1088P-201ENST00000516850 AGRPO00253 132 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 MEFVO15553 781 aaPredicted RBP4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CPP00450 1065 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ECI1P42126 302 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 KCNJ6P48051 423 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SARSP49591 514 aaKnown RBP4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 GJA9P57773 515 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 FXNQ16595 210 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 MROH9Q5TGP6 573 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 ETV3LQ6ZN32 361 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CEP68Q76N32 757 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 TEX2Q8IWB9 1127 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CARFQ8N187 725 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 PLEKHO2Q8TD55 490 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CHAMP1Q96JM3 812 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 MRGPRX3Q96LB0 322 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 YIPF4Q9BSR8 244 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 BDH2Q9BUT1 245 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 FBLN5Q9UBX5 448 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 COA3Q9Y2R0 106 aaPredicted RBP4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 SIT1Q9Y3P8 196 aa4.66□□□□□ -1.66
RNU6-1088P-201ENST00000516850 CHRNA2Q15822 529 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 ZFYVE27Q5T4F4 411 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 CD300LDQ6UXZ3 194 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 DBX2Q6ZNG2 339 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 MILR1Q7Z6M3 343 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 FRS2Q8WU20 508 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 BTN2A2Q8WVV5 523 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 BORCS6Q96GS4 357 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 TMEM169Q96HH4 297 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 NGRNQ9NPE2 291 aaKnown RBP4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 PRKAG3Q9UGI9 489 aa4.65□□□□□ -1.67
RNU6-1088P-201ENST00000516850 SGSM2O43147 1006 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms