RNA–Protein interactions for RNA: ENST00000515791.1

SFXN1-212, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-212ENST00000515791 GPHNQ9NQX3 736 aaPredicted RBP20.58■□□□□ 0.89
SFXN1-212ENST00000515791 KIAA1217Q5T5P2 1943 aa20.57■□□□□ 0.88
SFXN1-212ENST00000515791 A6NJR5 290 aa20.57■□□□□ 0.88
SFXN1-212ENST00000515791 NKRFO15226 690 aaKnown RBP eCLIP20.57■□□□□ 0.88
SFXN1-212ENST00000515791 DHX16O60231 1041 aaKnown RBP20.57■□□□□ 0.88
SFXN1-212ENST00000515791 ZEB2O60315 1214 aa20.57■□□□□ 0.88
SFXN1-212ENST00000515791 OR6J1Q8NGC5 347 aa20.57■□□□□ 0.88
SFXN1-212ENST00000515791 NSUN6Q8TEA1 469 aaKnown RBP20.57■□□□□ 0.88
SFXN1-212ENST00000515791 PIGSQ96S52 555 aa20.57■□□□□ 0.88
SFXN1-212ENST00000515791 MTA3Q9BTC8 594 aa20.57■□□□□ 0.88
SFXN1-212ENST00000515791 LY9Q9HBG7 655 aa20.57■□□□□ 0.88
SFXN1-212ENST00000515791 SCN10AQ9Y5Y9 1956 aa20.56■□□□□ 0.88
SFXN1-212ENST00000515791 SLC27A2O14975 620 aa20.56■□□□□ 0.88
SFXN1-212ENST00000515791 PPP2R5BQ15173 497 aa20.56■□□□□ 0.88
SFXN1-212ENST00000515791 TMEM67Q5HYA8 995 aa20.56■□□□□ 0.88
SFXN1-212ENST00000515791 IWS1Q96ST2 819 aa20.56■□□□□ 0.88
SFXN1-212ENST00000515791 RMDN3Q96TC7 470 aa20.56■□□□□ 0.88
SFXN1-212ENST00000515791 MPHOSPH6Q99547 160 aaKnown RBP20.56■□□□□ 0.88
SFXN1-212ENST00000515791 MAP3K14Q99558 947 aa20.56■□□□□ 0.88
SFXN1-212ENST00000515791 SEZ6LQ9BYH1 1024 aa20.56■□□□□ 0.88
SFXN1-212ENST00000515791 PCDHA1Q9Y5I3 950 aa20.56■□□□□ 0.88
SFXN1-212ENST00000515791 ERICH2A1L162 156 aa20.55■□□□□ 0.88
SFXN1-212ENST00000515791 B4DLN1 442 aa20.55■□□□□ 0.88
SFXN1-212ENST00000515791 B4GALT4O60513 344 aa20.55■□□□□ 0.88
SFXN1-212ENST00000515791 TXNP10599 105 aaKnown RBP20.55■□□□□ 0.88
SFXN1-212ENST00000515791 CPT1AP50416 773 aa20.55■□□□□ 0.88
SFXN1-212ENST00000515791 MRPL12P52815 198 aaKnown RBP20.55■□□□□ 0.88
SFXN1-212ENST00000515791 TRPV6Q9H1D0 765 aa20.55■□□□□ 0.88
SFXN1-212ENST00000515791 PXMP2Q9NR77 195 aa20.55■□□□□ 0.88
SFXN1-212ENST00000515791 POLR3EQ9NVU0 708 aa20.55■□□□□ 0.88
SFXN1-212ENST00000515791 BAZ2BQ9UIF8 2168 aaKnown RBP20.55■□□□□ 0.88
SFXN1-212ENST00000515791 UMODL1Q5DID0 1318 aa20.54■□□□□ 0.88
SFXN1-212ENST00000515791 TLR3O15455 904 aaKnown RBP20.54■□□□□ 0.88
SFXN1-212ENST00000515791 RGS20O76081 388 aa20.54■□□□□ 0.88
SFXN1-212ENST00000515791 CFBP00751 764 aa20.54■□□□□ 0.88
SFXN1-212ENST00000515791 SART3Q15020 963 aaKnown RBP20.54■□□□□ 0.88
SFXN1-212ENST00000515791 CREB3L3Q68CJ9 461 aa20.54■□□□□ 0.88
SFXN1-212ENST00000515791 VWCEQ96DN2 955 aa20.54■□□□□ 0.88
SFXN1-212ENST00000515791 BUD13Q9BRD0 619 aaKnown RBP eCLIP20.54■□□□□ 0.88
SFXN1-212ENST00000515791 MAP3K20Q9NYL2 800 aaKnown RBP20.54■□□□□ 0.88
SFXN1-212ENST00000515791 EYSQ5T1H1 3165 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 SH2B2O14492 632 aaPredicted RBP20.53■□□□□ 0.88
SFXN1-212ENST00000515791 PRC1O43663 620 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 NR3C2P08235 984 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 CSF2RAP15509 400 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 EIF2AK2P19525 551 aaKnown RBP20.53■□□□□ 0.88
SFXN1-212ENST00000515791 CYP2C18P33260 490 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 SMAD3P84022 425 aaKnown RBP20.53■□□□□ 0.88
SFXN1-212ENST00000515791 ARHGAP1Q07960 439 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 TTLL4Q14679 1199 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 STXBP2Q15833 593 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 LY6KQ17RY6 165 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 TMEM240Q5SV17 173 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 RASIP1Q5U651 963 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 CATIPQ7Z7H3 387 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 HOMER1Q86YM7 354 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 SAMD3Q8N6K7 520 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 GUCD1Q96NT3 240 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 PDCD2LQ9BRP1 358 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 NOC4LQ9BVI4 516 aaKnown RBP20.53■□□□□ 0.88
SFXN1-212ENST00000515791 PPP1R12CQ9BZL4 782 aa20.53■□□□□ 0.88
SFXN1-212ENST00000515791 ALDH8A1Q9H2A2 487 aaPredicted RBP20.53■□□□□ 0.88
SFXN1-212ENST00000515791 PNMA6FA0A0J9YX94 578 aa20.52■□□□□ 0.88
SFXN1-212ENST00000515791 EIF3JO75822 258 aaKnown RBP20.52■□□□□ 0.88
SFXN1-212ENST00000515791 ARHGEF16Q5VV41 709 aa20.52■□□□□ 0.88
SFXN1-212ENST00000515791 ZNF654Q8IZM8 581 aa20.52■□□□□ 0.88
SFXN1-212ENST00000515791 RNPC3Q96LT9 517 aaKnown RBP20.52■□□□□ 0.88
SFXN1-212ENST00000515791 MTG1Q9BT17 334 aaPredicted RBP20.52■□□□□ 0.88
SFXN1-212ENST00000515791 MYL10Q9BUA6 226 aa20.52■□□□□ 0.88
SFXN1-212ENST00000515791 DDX41Q9UJV9 622 aaKnown RBP20.52■□□□□ 0.88
SFXN1-212ENST00000515791 MYL3P08590 195 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 HOXA13P31271 388 aaPredicted RBP20.51■□□□□ 0.87
SFXN1-212ENST00000515791 MCM5P33992 734 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 PPIGQ13427 754 aaKnown RBP eCLIP20.51■□□□□ 0.87
SFXN1-212ENST00000515791 SEPT14Q6ZU15 432 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 IL31RAQ8NI17 732 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 TMEM87BQ96K49 555 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 SPZ1Q9BXG8 430 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 WNT8AQ9H1J5 351 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 HIPK3Q9H422 1215 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 ANO2Q9NQ90 1003 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 STXBP5LQ9Y2K9 1186 aa20.51■□□□□ 0.87
SFXN1-212ENST00000515791 DDAH1O94760 285 aa20.5■□□□□ 0.87
SFXN1-212ENST00000515791 SMARCA1P28370 1054 aa20.5■□□□□ 0.87
SFXN1-212ENST00000515791 LIFRP42702 1097 aa20.5■□□□□ 0.87
SFXN1-212ENST00000515791 PGM5Q15124 567 aa20.5■□□□□ 0.87
SFXN1-212ENST00000515791 NBPF20Q3BBV1 942 aa20.5■□□□□ 0.87
SFXN1-212ENST00000515791 VSIG10LQ86VR7 867 aa20.5■□□□□ 0.87
SFXN1-212ENST00000515791 TMEM199Q8N511 208 aa20.5■□□□□ 0.87
SFXN1-212ENST00000515791 PPP1R13LQ8WUF5 828 aa20.5■□□□□ 0.87
SFXN1-212ENST00000515791 TTYH1Q9H313 450 aaPredicted RBP20.5■□□□□ 0.87
SFXN1-212ENST00000515791 TRMT13Q9NUP7 481 aaKnown RBP20.5■□□□□ 0.87
SFXN1-212ENST00000515791 KPNA6O60684 536 aa20.49■□□□□ 0.87
SFXN1-212ENST00000515791 GH1P01241 217 aa20.49■□□□□ 0.87
SFXN1-212ENST00000515791 MMP3P08254 477 aa20.49■□□□□ 0.87
SFXN1-212ENST00000515791 SRBD1Q8N5C6 995 aaKnown RBP20.49■□□□□ 0.87
SFXN1-212ENST00000515791 AFG1LQ8WV93 481 aa20.49■□□□□ 0.87
SFXN1-212ENST00000515791 KAT2BQ92831 832 aa20.49■□□□□ 0.87
SFXN1-212ENST00000515791 EMID1Q96A84 441 aaPredicted RBP20.49■□□□□ 0.87
SFXN1-212ENST00000515791 FRMPD4Q14CM0 1322 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms