RNA–Protein interactions for RNA: ENST00000515127.1

AC004053.1-201, humanhuman

TSL 5 BASIC

Gene AC004053.1, Length 575 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004053.1-201ENST00000515127 MMP19Q99542 508 aa5□□□□□ -1.61
AC004053.1-201ENST00000515127 TBX22Q9Y458 520 aa5□□□□□ -1.61
AC004053.1-201ENST00000515127 NPFFR2Q9Y5X5 522 aa5□□□□□ -1.61
AC004053.1-201ENST00000515127 TEX51A0A1B0GUA7 166 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 A0A1W2PQ45 241 aaPredicted RBP4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 A0A1W2PQY0 241 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 SNRPB2P08579 225 aaKnown RBP4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 SEPHS1P49903 392 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 SQSTM1Q13501 440 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 NTRK3Q16288 839 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 TIGD5Q53EQ6 642 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 E4F1Q66K89 784 aaPredicted RBP4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 MBLAC2Q68D91 279 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 JAZF1Q86VZ6 243 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 SPPL2CQ8IUH8 684 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 CCDC103Q8IW40 242 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 KCTD13Q8WZ19 329 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 EXOC2Q96KP1 924 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 JMJD8Q96S16 334 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 IER2Q9BTL4 223 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 ZNF552Q9H707 407 aaPredicted RBP4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 KANSL2Q9H9L4 492 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 CWC22Q9HCG8 908 aaKnown RBP4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 GPRC5CQ9NQ84 441 aa4.99□□□□□ -1.61
AC004053.1-201ENST00000515127 TRBV23OR9-2A0A075B6M9 112 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 PRODHO43272 600 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 PSPNO60542 156 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 TRIM13O60858 407 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 USP2O75604 605 aaPredicted RBP4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 TBC1D8O95759 1140 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 PLS3P13797 630 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 PAMP19021 973 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 SNX17Q15036 470 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 HSF5Q4G112 596 aaPredicted RBP4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 HLA-DQA1Q5Y7H0 255 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 GIMAP6Q6P9H5 292 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 NSMFQ6X4W1 530 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 NLRX1Q86UT6 975 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 GGNQ86UU5 652 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 SCUBE1Q8IWY4 988 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 ZDHHC14Q8IZN3 488 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 CXorf38Q8TB03 319 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 INTS4Q96HW7 963 aaKnown RBP4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 TMEM260Q9NX78 707 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 CLEC1BQ9P126 229 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 TMEFF2Q9UIK5 374 aaPredicted RBP4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 GPR160Q9UJ42 338 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 ACSL6Q9UKU0 697 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 PTCH2Q9Y6C5 1203 aa4.98□□□□□ -1.61
AC004053.1-201ENST00000515127 WTIPA6NIX2 430 aaPredicted RBP4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 CELA3BP08861 270 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 C6orf222P0C671 652 aaPredicted RBP4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 ECI1P42126 302 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 CORO7P57737 925 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 RTP1P59025 263 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 PRSS53Q2L4Q9 553 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 KRTAP5-3Q6L8H2 238 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 NAT16Q8N8M0 369 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 ZSWIM2Q8NEG5 633 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 PANK1Q8TE04 598 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 SH3TC2Q8TF17 1288 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 PLCD4Q9BRC7 762 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 DHRS4Q9BTZ2 278 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 GCM1Q9NP62 436 aa4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 YBX2Q9Y2T7 364 aaKnown RBP4.97□□□□□ -1.61
AC004053.1-201ENST00000515127 TRBV23-1A0A0A0MS06 115 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 CCDC163A0A0D9SF12 145 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 NPHP3-ACAD11A0A0J9YXS1 232 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 OTOL1A6NHN0 477 aaPredicted RBP4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 PPP1R11O60927 126 aaPredicted RBP4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 L1CAMP32004 1257 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 SUMO1P63165 101 aaKnown RBP4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 KCNAB2Q13303 367 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 SSPNQ14714 243 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 INF2Q27J81 1249 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 SKOR2Q2VWA4 1001 aaPredicted RBP4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 FAM209AQ5JX71 171 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 IQCEQ6IPM2 695 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 GALNT18Q6P9A2 607 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 RSPO2Q6UXX9 243 aaPredicted RBP4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 CEP128Q6ZU80 1094 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 SIRT2Q8IXJ6 389 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 Q8N1Y9 231 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 NLGN1Q8N2Q7 840 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 SIRT5Q9NXA8 310 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 RTEL1Q9NZ71 1219 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 MRPS23Q9Y3D9 190 aaKnown RBP4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 IRAK3Q9Y616 596 aa4.96□□□□□ -1.62
AC004053.1-201ENST00000515127 TLDC2A0PJX2 215 aa4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 C7orf72A4D263 438 aa4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 ENPP3O14638 875 aa4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 MEFVO15553 781 aaPredicted RBP4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 KCNQ2O43526 872 aa4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 PI3P19957 117 aa4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 LTBRP36941 435 aa4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 KCNJ6P48051 423 aa4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 GALK1P51570 392 aa4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 SRSF3P84103 164 aaKnown RBP4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 MVKQ03426 396 aa4.95□□□□□ -1.62
AC004053.1-201ENST00000515127 KIR3DS1Q14943 382 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms