RNA–Protein interactions for RNA: ENST00000514326.5

SEC31A-238, Transcript of SEC31 homolog A, COPII coat complex component, human

TSL 3

Gene SEC31A, Length 847 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEC31A-238	ENST00000514326	CALM1	P0DP23	149 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	CALM2	P0DP24	149 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	CALM3	P0DP25	149 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	MRPL12	P52815	198 aa	Known RBP	18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	MDM2	Q00987	491 aa	Predicted RBP	18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	GHRHR	Q02643	423 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	FSCN1	Q16658	493 aa	Known RBP	18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	ARHGEF16	Q5VV41	709 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	SH3RF1	Q7Z6J0	888 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	MICU3	Q86XE3	530 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	CCDC82	Q8N4S0	544 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	FANCB	Q8NB91	859 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	COPS5	Q92905	334 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	VTI1A	Q96AJ9	217 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	RRP36	Q96EU6	259 aa	Known RBP	18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	GLT1D1	Q96MS3	346 aa		18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.22	■□□□□ 0.51
SEC31A-238	ENST00000514326	hCG_1642624	A0A1W2PR95	340 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	TRIM43B	A6NCK2	446 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	PQBP1	O60828	265 aa	Known RBP	18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	REC8	O95072	547 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	GNAQ	P50148	359 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	APOA5	Q6Q788	366 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	CXCL17	Q6UXB2	119 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	TRIM43	Q96BQ3	446 aa	Predicted RBP	18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	JAKMIP1	Q96N16	626 aa	Known RBP	18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	LZTS2	Q9BRK4	669 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	PDLIM7	Q9NR12	457 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	PXMP2	Q9NR77	195 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326		Q9Y3F1	56 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	ELP1	O95163	1332 aa		18.21	■□□□□ 0.51
SEC31A-238	ENST00000514326	GCOM1	H8Y6P7	765 aa	Predicted RBP	18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	ARIH2	O95376	493 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	POLR2M	P0CAP2	368 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	SMARCA1	P28370	1054 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	BMP8B	P34820	402 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	FXR1	P51114	621 aa	Known RBP eCLIP	18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	TRAF1	Q13077	416 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	PPP2R5B	Q15173	497 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	SYNE3	Q6ZMZ3	975 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	SEPT14	Q6ZU15	432 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	TMTC3	Q6ZXV5	915 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	FCHSD1	Q86WN1	690 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	OR6J1	Q8NGC5	347 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	SCFD2	Q8WU76	684 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	IWS1	Q96ST2	819 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	PRKAG2	Q9UGJ0	569 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	TRIOBP	Q9H2D6	2365 aa		18.2	■□□□□ 0.5
SEC31A-238	ENST00000514326	MYH6	P13533	1939 aa		18.19	■□□□□ 0.5
SEC31A-238	ENST00000514326	NR3C2	P08235	984 aa		18.19	■□□□□ 0.5
SEC31A-238	ENST00000514326	TXN	P10599	105 aa	Known RBP	18.19	■□□□□ 0.5
SEC31A-238	ENST00000514326	CDK7	P50613	346 aa		18.19	■□□□□ 0.5
SEC31A-238	ENST00000514326	STXBP2	Q15833	593 aa		18.19	■□□□□ 0.5
SEC31A-238	ENST00000514326	UBE2O	Q9C0C9	1292 aa	Known RBP	18.19	■□□□□ 0.5
SEC31A-238	ENST00000514326	MAP3K20	Q9NYL2	800 aa	Known RBP	18.19	■□□□□ 0.5
SEC31A-238	ENST00000514326	SEC63	Q9UGP8	760 aa	Known RBP	18.19	■□□□□ 0.5
SEC31A-238	ENST00000514326		A0A0U1RQG5	324 aa	Predicted RBP	18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	KLF18	A0A0U1RQI7	1052 aa		18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	ZBTB43	O43298	467 aa		18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	HMGB1	P09429	215 aa	Known RBP	18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	CLTB	P09497	229 aa		18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	MYCL	P12524	364 aa	Predicted RBP	18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	FAAP100	Q0VG06	881 aa		18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	LY6K	Q17RY6	165 aa		18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	CCDC62	Q6P9F0	684 aa		18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	ANKRD33	Q7Z3H0	272 aa		18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	IL31RA	Q8NI17	732 aa		18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	ZFP91	Q96JP5	570 aa	Predicted RBP	18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	LBHD1	Q9BQE6	289 aa	Predicted RBP	18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	PDCD2L	Q9BRP1	358 aa		18.18	■□□□□ 0.5
SEC31A-238	ENST00000514326	ARVCF	O00192	962 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	ZEB2	O60315	1214 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	EIF3J	O75822	258 aa	Known RBP	18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	ITGB8	P26012	769 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	PSMC6	P62333	389 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	TTLL4	Q14679	1199 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	RTN1	Q16799	776 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	BLOC1S2	Q6QNY1	142 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326		Q6ZUG5	572 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	SAMD3	Q8N6K7	520 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	BAD	Q92934	168 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	USP26	Q9BXU7	913 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	NAP1L2	Q9ULW6	460 aa	Predicted RBP	18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	GRIN2D	O15399	1336 aa		18.17	■□□□□ 0.5
SEC31A-238	ENST00000514326	GOLGA8A	A7E2F4	631 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	GOLGA8B	A8MQT2	603 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	DCDC2C	A8MYV0	355 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	NKRF	O15226	690 aa	Known RBP eCLIP	18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	MYL3	P08590	195 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	RPS6KB1	P23443	525 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	FGD1	P98174	961 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	APOBR	Q0VD83	1088 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	PGM5	Q15124	567 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	USP17L6P	Q6QN14	398 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	TOX2	Q96NM4	488 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	FAM217B	Q9NTX9	383 aa	Predicted RBP	18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326	TMEM39A	Q9NV64	488 aa		18.16	■□□□□ 0.5
SEC31A-238	ENST00000514326		A0A1W2PPC1	479 aa		18.15	■□□□□ 0.5
SEC31A-238	ENST00000514326	KIAA0355	O15063	1070 aa		18.15	■□□□□ 0.5
SEC31A-238	ENST00000514326	CABYR	O75952	493 aa		18.15	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms