RNA–Protein interactions for RNA: ENST00000513803.5

NFKB1-211, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 4

Gene NFKB1, Length 612 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-211ENST00000513803 COL19A1Q14993 1142 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 SBK1Q52WX2 424 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 IER5LQ5T953 404 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 LRRC8DQ7L1W4 858 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 RNF135Q8IUD6 432 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 SUGP1Q8IWZ8 645 aaKnown RBP12.92□□□□□ -0.34
NFKB1-211ENST00000513803 CLASRPQ8N2M8 674 aaKnown RBP12.92□□□□□ -0.34
NFKB1-211ENST00000513803 PPP1R13LQ8WUF5 828 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 IL1RAPL2Q9NP60 686 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 PAG1Q9NWQ8 432 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 CLDND1Q9NY35 253 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 TNNQ9UQP3 1299 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 EXOC6BQ9Y2D4 811 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 COL4A4P53420 1690 aaPredicted RBP12.92□□□□□ -0.34
NFKB1-211ENST00000513803 MYO7AQ13402 2215 aa12.92□□□□□ -0.34
NFKB1-211ENST00000513803 TRIP12Q14669 1992 aaPredicted RBP12.91□□□□□ -0.34
NFKB1-211ENST00000513803 SCN10AQ9Y5Y9 1956 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 IGKV6D-41A0A0C4DH26 115 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 ZNF316A6NFI3 1004 aaPredicted RBP12.91□□□□□ -0.34
NFKB1-211ENST00000513803 H3BNC9 293 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 PLA2G6O60733 806 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 PPP2R5BQ15173 497 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 SMAD2Q15796 467 aaKnown RBP12.91□□□□□ -0.34
NFKB1-211ENST00000513803 SLFNL1Q499Z3 407 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 EPC2Q52LR7 807 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 TCEAL5Q5H9L2 206 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 MUM1L1Q5H9M0 696 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 TRIM67Q6ZTA4 783 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 STK11IPQ8N1F8 1099 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 CEP95Q96GE4 821 aa12.91□□□□□ -0.34
NFKB1-211ENST00000513803 MPHOSPH6Q99547 160 aaKnown RBP12.91□□□□□ -0.34
NFKB1-211ENST00000513803 NSUN3Q9H649 340 aaKnown RBP12.91□□□□□ -0.34
NFKB1-211ENST00000513803 TMEM221A6NGB7 291 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 MINDY4BA8MYZ0 360 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 M0R296 226 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 NBNO60934 754 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 AMHP03971 560 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 IFIT2P09913 472 aaKnown RBP12.9□□□□□ -0.34
NFKB1-211ENST00000513803 SLC1A4P43007 532 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 ALDH5A1P51649 535 aaPredicted RBP12.9□□□□□ -0.34
NFKB1-211ENST00000513803 RBL2Q08999 1139 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 TCF15Q12870 199 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 GPM6BQ13491 265 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 ZSCAN25Q6NSZ9 544 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 GIMAP6Q6P9H5 292 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 SESTD1Q86VW0 696 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 RHPN1Q8TCX5 695 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 SCFD2Q8WU76 684 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 GMCL1Q96IK5 515 aa12.9□□□□□ -0.34
NFKB1-211ENST00000513803 PURBQ96QR8 312 aaKnown RBP12.9□□□□□ -0.34
NFKB1-211ENST00000513803 FAM186AA6NE01 2351 aa12.89□□□□□ -0.35
NFKB1-211ENST00000513803 TXNP10599 105 aaKnown RBP12.89□□□□□ -0.35
NFKB1-211ENST00000513803 CKBP12277 381 aa12.89□□□□□ -0.35
NFKB1-211ENST00000513803 HTRA4P83105 476 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-211ENST00000513803 PDE4DQ08499 809 aa12.89□□□□□ -0.35
NFKB1-211ENST00000513803 BAATQ14032 418 aaPredicted RBP12.89□□□□□ -0.35
NFKB1-211ENST00000513803 ZKSCAN2Q63HK3 967 aa12.89□□□□□ -0.35
NFKB1-211ENST00000513803 CCPG1Q9ULG6 757 aa12.89□□□□□ -0.35
NFKB1-211ENST00000513803 C5orf42Q9H799 3197 aa12.89□□□□□ -0.35
NFKB1-211ENST00000513803 B4DLN1 442 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 MCCP23508 829 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 LTBRP36941 435 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 MRPL12P52815 198 aaKnown RBP12.88□□□□□ -0.35
NFKB1-211ENST00000513803 RCSD1Q6JBY9 416 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 GDF6Q6KF10 455 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-211ENST00000513803 ERMP1Q7Z2K6 904 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 TMEM192Q8IY95 271 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 FBXL6Q8N531 539 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 SP7Q8TDD2 431 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-211ENST00000513803 ATOH1Q92858 354 aaPredicted RBP12.88□□□□□ -0.35
NFKB1-211ENST00000513803 CTAGE1Q96RT6 745 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 PUS7LQ9H0K6 701 aaKnown RBP12.88□□□□□ -0.35
NFKB1-211ENST00000513803 BOLA2Q9H3K6 86 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 SIP14410 1827 aa12.88□□□□□ -0.35
NFKB1-211ENST00000513803 PTPDC1A2A3K4 754 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 STXBP3O00186 592 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 MBTPS2O43462 519 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 LGR5O75473 907 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 PRDM1O75626 825 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 ICAM1P05362 532 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 TSPY3P0CV98 308 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 TSPY8P0CW00 308 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 SNAP25P60880 206 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 PDE4BQ07343 736 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 TCTN1Q2MV58 587 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 PPP4R3BQ5MIZ7 849 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 CEP85Q6P2H3 762 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.87□□□□□ -0.35
NFKB1-211ENST00000513803 RPAINQ86UA6 219 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 MYOCDQ8IZQ8 938 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 C7orf31Q8N865 590 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 NEDD1Q8NHV4 660 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 DHX38Q92620 1227 aaKnown RBP12.87□□□□□ -0.35
NFKB1-211ENST00000513803 COPS5Q92905 334 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 KIF1BPQ96EK5 621 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 STRBPQ96SI9 672 aaKnown RBP12.87□□□□□ -0.35
NFKB1-211ENST00000513803 PRR12Q9ULL5 1215 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 TANC1Q9C0D5 1861 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 EMSYQ7Z589 1322 aa12.87□□□□□ -0.35
NFKB1-211ENST00000513803 PTPRSQ13332 1948 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms