RNA–Protein interactions for RNA: ENST00000513761.5

CLCN3-209, Transcript of chloride voltage-gated channel 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLCN3, Length 6,692 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-209ENST00000513761 KIAA1024Q9UPX6 916 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 PP2D1A8MPX8 630 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 GUCY2CP25092 1073 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 GRIN1Q05586 938 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 WHAMMQ8TF30 809 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 OSBPL9Q96SU4 736 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 PARP2Q9UGN5 583 aa8.5□□□□□ -1.05
CLCN3-209ENST00000513761 NR2F2P24468 414 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 GUCY1A3Q02108 690 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 PPP2R5AQ15172 486 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 RASGRP2Q7LDG7 609 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 VPS52Q8N1B4 723 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 TBCKQ8TEA7 893 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 LRRC1Q9BTT6 524 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 CCDC87Q9NVE4 849 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 DDX25Q9UHL0 483 aaKnown RBP8.49□□□□□ -1.05
CLCN3-209ENST00000513761 HMGB1P1B2RPK0 211 aaPredicted RBP8.49□□□□□ -1.05
CLCN3-209ENST00000513761 UFL1O94874 794 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 BCRP11274 1271 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 BIRC3Q13489 604 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 TPH2Q8IWU9 490 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLCN3-209ENST00000513761 MAGOHBQ96A72 148 aaKnown RBP8.49□□□□□ -1.05
CLCN3-209ENST00000513761 CUEDC2Q9H467 287 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 SENP2Q9HC62 589 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 PACSIN2Q9UNF0 486 aaPredicted RBP8.49□□□□□ -1.05
CLCN3-209ENST00000513761 ERBB3P21860 1342 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 FKBP3Q00688 224 aaKnown RBP8.49□□□□□ -1.05
CLCN3-209ENST00000513761 MUM1L1Q5H9M0 696 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 CCDC13Q8IYE1 715 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 WDR66Q8TBY9 1149 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 TCHPQ9BT92 498 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 VPS37BQ9H9H4 285 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 DAAM1Q9Y4D1 1078 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 STK36Q9NRP7 1315 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 RFX7Q2KHR2 1363 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 LRRC53A6NM62 1247 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 H3BQF6 201 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 SLC1A4P43007 532 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 CYP4A11Q02928 519 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 MUM1Q2TAK8 710 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 PRR16Q569H4 304 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 ATG9AQ7Z3C6 839 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 TBC1D1Q86TI0 1168 aaPredicted RBP8.49□□□□□ -1.05
CLCN3-209ENST00000513761 KIFAP3Q92845 792 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 ZNF622Q969S3 477 aaKnown RBP eCLIP8.49□□□□□ -1.05
CLCN3-209ENST00000513761 ADD3Q9UEY8 706 aaKnown RBP8.49□□□□□ -1.05
CLCN3-209ENST00000513761 ANO9A1A5B4 782 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 ARHGEF35A5YM69 484 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 STAMBPO95630 424 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 PAF1Q8N7H5 531 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 MAGEF1Q9HAY2 307 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 RNF14Q9UBS8 474 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 ZBTB1Q9Y2K1 713 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 COL4A3BPQ9Y5P4 624 aa8.49□□□□□ -1.05
CLCN3-209ENST00000513761 CHUKO15111 745 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 THAP12O43422 761 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 NLRP10Q86W26 655 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 TTLL11Q8NHH1 800 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 KLHL29Q96CT2 875 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 SMARCAL1Q9NZC9 954 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 HECW2Q9P2P5 1572 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 PTPRMP28827 1452 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 CIB2O75838 187 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 ADCY8P40145 1251 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 ANTXR2P58335 489 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 GALNT17Q6IS24 598 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 CNKSR2Q8WXI2 1034 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 IMPG2Q9BZV3 1241 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 ACTR5Q9H9F9 607 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 NMT2O60551 498 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 SUN1O94901 812 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 GAS8O95995 478 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 GYPCP04921 128 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 SERPING1P05155 500 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 ATP2A2P16615 1042 aaKnown RBP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 FOXO4P98177 505 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 SPATA4Q8NEY3 305 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 KCNB2Q92953 911 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 AK8Q96MA6 479 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 ZC3H12CQ9C0D7 883 aaKnown RBP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 FAM114A2Q9NRY5 505 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 ZNF446Q9NWS9 450 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 HPCAL4Q9UM19 191 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 AGTPBP1Q9UPW5 1226 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 AXIN2Q9Y2T1 843 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 KDM3AQ9Y4C1 1321 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 HARSP12081 509 aaKnown RBP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 MESDQ14696 234 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 OTUD6AQ7L8S5 288 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 STAG1Q8WVM7 1258 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 PSTPIP2Q9H939 334 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 PPP1R1BQ9UD71 204 aaPredicted RBP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 PLEKHG1Q9ULL1 1385 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 CPS1P31327 1500 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 UBE2Q2LH0YL09 131 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 BACH1O14867 736 aa8.48□□□□□ -1.05
CLCN3-209ENST00000513761 RPS8P62241 208 aaKnown RBP8.48□□□□□ -1.05
CLCN3-209ENST00000513761 LAD1O00515 517 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms