RNA–Protein interactions for RNA: ENST00000513266.5

PTPN20-228, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 818 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-228ENST00000513266 SMRP1Q8NCR6 262 aa11.56□□□□□ -0.56
PTPN20-228ENST00000513266 IGFLR1Q9H665 355 aa11.56□□□□□ -0.56
PTPN20-228ENST00000513266 PRKRIP1Q9H875 184 aaPredicted RBP11.56□□□□□ -0.56
PTPN20-228ENST00000513266 A1CFQ9NQ94 594 aaKnown RBP11.56□□□□□ -0.56
PTPN20-228ENST00000513266 MCM9Q9NXL9 1143 aa11.56□□□□□ -0.56
PTPN20-228ENST00000513266 NOD1Q9Y239 953 aa11.56□□□□□ -0.56
PTPN20-228ENST00000513266 KIAA1671Q9BY89 1806 aa11.56□□□□□ -0.56
PTPN20-228ENST00000513266 GPR179Q6PRD1 2367 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 PARNO95453 639 aaKnown RBP11.55□□□□□ -0.56
PTPN20-228ENST00000513266 CPT1AP50416 773 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 RBL2Q08999 1139 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 PTGISQ16647 500 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 KIAA1211Q6ZU35 1233 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 MYOCDQ8IZQ8 938 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 CCDC155Q8N6L0 562 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 PRPF38AQ8NAV1 312 aaKnown RBP11.55□□□□□ -0.56
PTPN20-228ENST00000513266 SLC38A10Q9HBR0 1119 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 INCENPQ9NQS7 918 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 HOMER2Q9NSB8 354 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 CLEC1BQ9P126 229 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 SWAP70Q9UH65 585 aa11.55□□□□□ -0.56
PTPN20-228ENST00000513266 USP17L12C9JPN9 530 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 USP17L21D6R901 530 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 GRM6O15303 877 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 SRGAP3O43295 1099 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 ZBED4O75132 1171 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 CKBP12277 381 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 NDUFV1P49821 464 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 DDX10Q13206 875 aaKnown RBP11.54□□□□□ -0.56
PTPN20-228ENST00000513266 MBTPS1Q14703 1052 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 TRAF7Q6Q0C0 670 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 RPGRIP1Q96KN7 1286 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 DBNDD2Q9BQY9 259 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 VTA1Q9NP79 307 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 GPHNQ9NQX3 736 aaPredicted RBP11.54□□□□□ -0.56
PTPN20-228ENST00000513266 USP15Q9Y4E8 981 aaPredicted RBP11.54□□□□□ -0.56
PTPN20-228ENST00000513266 PCDHGC5Q9Y5F6 944 aa11.54□□□□□ -0.56
PTPN20-228ENST00000513266 SETXQ7Z333 2677 aaKnown RBP11.53□□□□□ -0.56
PTPN20-228ENST00000513266 LGR5O75473 907 aa11.53□□□□□ -0.56
PTPN20-228ENST00000513266 AMHP03971 560 aa11.53□□□□□ -0.56
PTPN20-228ENST00000513266 COASYQ13057 564 aa11.53□□□□□ -0.56
PTPN20-228ENST00000513266 GDF6Q6KF10 455 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-228ENST00000513266 ZNF512BQ96KM6 892 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-228ENST00000513266 CCDC17Q96LX7 622 aa11.53□□□□□ -0.56
PTPN20-228ENST00000513266 PHF7Q9BWX1 381 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-228ENST00000513266 LMAN2LQ9H0V9 348 aa11.53□□□□□ -0.56
PTPN20-228ENST00000513266 KANSL2Q9H9L4 492 aa11.53□□□□□ -0.56
PTPN20-228ENST00000513266 DCP1AQ9NPI6 582 aaPredicted RBP11.53□□□□□ -0.56
PTPN20-228ENST00000513266 COG6Q9Y2V7 657 aa11.53□□□□□ -0.56
PTPN20-228ENST00000513266 C5orf67F2Z3F1 127 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 LINC00271P0C7V0 271 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 OAZ1P54368 228 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 MTX1Q13505 466 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 CCDC184Q52MB2 194 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 CCDC158Q5M9N0 1113 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 OR6J1Q8NGC5 347 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 MORC4Q8TE76 937 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 SDR42E1Q8WUS8 393 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 SSH1Q8WYL5 1049 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 KIFC2Q96AC6 838 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 YME1L1Q96TA2 773 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 MEIS3Q99687 375 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 WDR11Q9BZH6 1224 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 ACAD9Q9H845 621 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 MYH7BA7E2Y1 1941 aa11.52□□□□□ -0.57
PTPN20-228ENST00000513266 PLXNA4Q9HCM2 1894 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 A6NJR5 290 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 E9PSI1 815 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 CSPG5O95196 566 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 NDUFB10O96000 172 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 HOXB3P14651 431 aaPredicted RBP11.51□□□□□ -0.57
PTPN20-228ENST00000513266 CTNNB1P35222 781 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 CDK8P49336 464 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 CHMP4BP1P59074 171 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 CAMK1Q14012 370 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 ACAP1Q15027 740 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
PTPN20-228ENST00000513266 DBF4BQ8NFT6 615 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 PURBQ96QR8 312 aaKnown RBP11.51□□□□□ -0.57
PTPN20-228ENST00000513266 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTPN20-228ENST00000513266 CRNKL1Q9BZJ0 848 aaKnown RBP11.51□□□□□ -0.57
PTPN20-228ENST00000513266 ANTXR1Q9H6X2 564 aa11.51□□□□□ -0.57
PTPN20-228ENST00000513266 CTDP1Q9Y5B0 961 aaPredicted RBP11.51□□□□□ -0.57
PTPN20-228ENST00000513266 CYP2D7A0A087X1C5 515 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 MAGEB6P1A0A0J9YX57 407 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 RBM47A0AV96 593 aaKnown RBP11.5□□□□□ -0.57
PTPN20-228ENST00000513266 F5H6K3 240 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 KPNA6O60684 536 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 GLP2RO95838 553 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 ARP10275 920 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 KLRC3Q07444 240 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 TRIM71Q2Q1W2 868 aaKnown RBP11.5□□□□□ -0.57
PTPN20-228ENST00000513266 TNNI3KQ59H18 835 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 ZNF618Q5T7W0 954 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 ADGRD2Q7Z7M1 963 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 SESTD1Q86VW0 696 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 WNT8BQ93098 351 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 TOP1MTQ969P6 601 aa11.5□□□□□ -0.57
PTPN20-228ENST00000513266 C11orf84Q9BUA3 381 aaPredicted RBP11.5□□□□□ -0.57
PTPN20-228ENST00000513266 RNF146Q9NTX7 359 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms