RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 TSPOAP1O95153 1857 aa4.65□□□□□ -1.66
VCAN-209ENST00000513016 E2F5Q15329 346 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 ZMYM1Q5SVZ6 1142 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 RNF187Q5TA31 235 aaPredicted RBP4.65□□□□□ -1.67
VCAN-209ENST00000513016 STRIP1Q5VSL9 837 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 CASC4Q6P4E1 433 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 KCTD1Q719H9 257 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 DGKHQ86XP1 1220 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 MB21D1Q8N884 522 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 GRK7Q8WTQ7 553 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 DDX50Q9BQ39 737 aaKnown RBP4.65□□□□□ -1.67
VCAN-209ENST00000513016 AAASQ9NRG9 546 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 SYNMO15061 1565 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 H7C1W4 665 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 THAP12O43422 761 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 GBP1P32455 592 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 SPP2Q13103 211 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 CCDC122Q5T0U0 273 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 CCDC25Q86WR0 208 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 PRPF38AQ8NAV1 312 aaKnown RBP4.65□□□□□ -1.67
VCAN-209ENST00000513016 BEST2Q8NFU1 509 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 NELFBQ8WX92 580 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 TRIM62Q9BVG3 475 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 DISC1Q9NRI5 854 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 CYP19A1P11511 503 aaPredicted RBP4.65□□□□□ -1.67
VCAN-209ENST00000513016 SKILP12757 684 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 VEGFAP15692 232 aaPredicted RBP4.65□□□□□ -1.67
VCAN-209ENST00000513016 NLRP12P59046 1061 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 CC2D1AQ6P1N0 951 aaPredicted RBP4.65□□□□□ -1.67
VCAN-209ENST00000513016 C4orf50Q6ZRC1 276 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 EEPD1Q7L9B9 569 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 TMTC1Q8IUR5 882 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 MICALL2Q8IY33 904 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 SIX6OS1Q8N1H7 587 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 TTLL11Q8NHH1 800 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 FAM114A2Q9NRY5 505 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 RNF146Q9NTX7 359 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 GUCA1BQ9UMX6 200 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 POLIQ9UNA4 740 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 SSH2Q76I76 1423 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 TRAPPC3O43617 180 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 FGAP02671 866 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 SFNP31947 248 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 DYNLL1P63167 89 aaKnown RBP4.65□□□□□ -1.67
VCAN-209ENST00000513016 KRT33BQ14525 404 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 NFIXQ14938 502 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 TBC1D9BQ66K14 1250 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 NOSTRINQ8IVI9 506 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 ANKRD13AQ8IZ07 590 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 STAG1Q8WVM7 1258 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 P3H4Q92791 437 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 EAF2Q96CJ1 260 aaPredicted RBP4.65□□□□□ -1.67
VCAN-209ENST00000513016 ZSWIM4Q9H7M6 989 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 SLC38A10Q9HBR0 1119 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 IRAK4Q9NWZ3 460 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 UTP11Q9Y3A2 253 aaKnown RBP4.65□□□□□ -1.67
VCAN-209ENST00000513016 TACC3Q9Y6A5 838 aa4.65□□□□□ -1.67
VCAN-209ENST00000513016 ESPNB1AK53 854 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 GTPBP6O43824 516 aaPredicted RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 PSMC2P35998 433 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 GARSP41250 739 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 MECOMQ03112 1051 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 SFSWAPQ12872 951 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 ARL13BQ3SXY8 428 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 HSP90AA4PQ58FG1 418 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 IGSF22Q8N9C0 903 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 NUDT12Q9BQG2 462 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 FAM49AQ9H0Q0 323 aaPredicted RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 NR2E3Q9Y5X4 410 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 SPATA31A1Q5TZJ5 1347 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 CLASP1Q7Z460 1538 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 ENTPD3O75355 529 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 RPLP2P05387 115 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 DLATP10515 647 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 STAT3P40763 770 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 PPP2R5DQ14738 602 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 UAP1Q16222 522 aaPredicted RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 SNRNP48Q6IEG0 339 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 PPP1R18Q6NYC8 613 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 EFHBQ8N7U6 833 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 TRERF1Q96PN7 1200 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 MINPP1Q9UNW1 487 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 ADCY9O60503 1353 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 TARBP1Q13395 1621 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 K7ERI5 159 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 CELF2O95319 508 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 RAD51AP2Q09MP3 1159 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 TADA2BQ86TJ2 420 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 BBOF1Q8ND07 529 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 FAM149B1Q96BN6 582 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 CCDC51Q96ER9 411 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 PUS3Q9BZE2 481 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 NCOA5Q9HCD5 579 aaKnown RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 RIC8AQ9NPQ8 531 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 IFNKQ9P0W0 207 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 MYO1AQ9UBC5 1043 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 STRIP2Q9ULQ0 834 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 PCDHB4Q9Y5E5 795 aa4.64□□□□□ -1.67
VCAN-209ENST00000513016 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.64□□□□□ -1.67
VCAN-209ENST00000513016 ZCCHC11Q5TAX3 1644 aaKnown RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms