RNA–Protein interactions for RNA: ENST00000512531.1

MSH3-203, Transcript of mutS homolog 3, humanhuman

TSL 5

Gene MSH3, Length 531 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH3-203ENST00000512531 COL9A3Q14050 684 aaPredicted RBP10.81□□□□□ -0.68
MSH3-203ENST00000512531 MTFR1Q15390 333 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 NTRK3Q16288 839 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 GPAT2Q6NUI2 795 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 PRRT2Q7Z6L0 340 aaPredicted RBP10.81□□□□□ -0.68
MSH3-203ENST00000512531 SCYL3Q8IZE3 742 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 CCDC12Q8WUD4 166 aaPredicted RBP10.81□□□□□ -0.68
MSH3-203ENST00000512531 BPIFA3Q9BQP9 254 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 TRIM5Q9C035 493 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 PRO3102Q9H379 93 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 RRAGDQ9NQL2 400 aaPredicted RBP10.81□□□□□ -0.68
MSH3-203ENST00000512531 MCM9Q9NXL9 1143 aa10.81□□□□□ -0.68
MSH3-203ENST00000512531 CCL5P13501 91 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 CDC27P30260 824 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 CDC25BP30305 580 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 KCNA1Q09470 495 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 NFIAQ12857 509 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 GALNT17Q6IS24 598 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 CTR9Q6PD62 1173 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 DGKHQ86XP1 1220 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 CCDC144CPQ8IYA2 1237 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 DIS3L2Q8IYB7 885 aaKnown RBP10.8□□□□□ -0.68
MSH3-203ENST00000512531 CCDC148Q8NFR7 591 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 DPF3Q92784 378 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 PHKBQ93100 1093 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 NAP1L5Q96NT1 182 aaPredicted RBP10.8□□□□□ -0.68
MSH3-203ENST00000512531 RNF208Q9H0X6 261 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 DCP1AQ9NPI6 582 aaPredicted RBP10.8□□□□□ -0.68
MSH3-203ENST00000512531 SCUBE2Q9NQ36 999 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 USP40Q9NVE5 1235 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 AFG3L2Q9Y4W6 797 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 GAKO14976 1311 aa10.8□□□□□ -0.68
MSH3-203ENST00000512531 ZSWIM8A7E2V4 1837 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 CBFA2T2O43439 604 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 CTNND1O60716 968 aaKnown RBP10.79□□□□□ -0.68
MSH3-203ENST00000512531 ZNF202O95125 648 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 ATG7O95352 703 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 SGPL1O95470 568 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 TPM2P07951 284 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 TSPY3P0CV98 308 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 TSPY8P0CW00 308 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 PTPRAP18433 802 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 PRDX5P30044 214 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 TRAPPC10P48553 1259 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 DYNLL1P63167 89 aaKnown RBP10.79□□□□□ -0.68
MSH3-203ENST00000512531 PRKCZQ05513 592 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 TCP10Q12799 353 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 SEC23AQ15436 765 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 DNTTIP2Q5QJE6 756 aaKnown RBP10.79□□□□□ -0.68
MSH3-203ENST00000512531 SARM1Q6SZW1 724 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 RAB11FIP4Q86YS3 637 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 FMR1NBQ8N0W7 255 aaPredicted RBP10.79□□□□□ -0.68
MSH3-203ENST00000512531 U2AF1L4Q8WU68 220 aaKnown RBP10.79□□□□□ -0.68
MSH3-203ENST00000512531 FERMT2Q96AC1 680 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 ZKSCAN3Q9BRR0 538 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 SLC4A5Q9BY07 1137 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 CBX8Q9HC52 389 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 PICK1Q9NRD5 415 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 CLIC4Q9Y696 253 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 MROH7-TTC4A0A0A0MT08 1334 aa10.79□□□□□ -0.68
MSH3-203ENST00000512531 TRIM75PA6NK02 468 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 PIK3CDO00329 1044 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 ADCY3O60266 1144 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 FARP2O94887 1054 aaPredicted RBP10.78□□□□□ -0.68
MSH3-203ENST00000512531 SMC2O95347 1197 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 RXRAP19793 462 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 TXLNAP40222 546 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 GSDMDP57764 484 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 NLRP12P59046 1061 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 SNW1Q13573 536 aaKnown RBP10.78□□□□□ -0.68
MSH3-203ENST00000512531 CT47A1Q5JQC4 288 aaPredicted RBP10.78□□□□□ -0.68
MSH3-203ENST00000512531 MORN1Q5T089 497 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 ENAHQ8N8S7 591 aaPredicted RBP10.78□□□□□ -0.68
MSH3-203ENST00000512531 CNNM3Q8NE01 707 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 ENGASEQ8NFI3 743 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 DNAJC25Q9H1X3 360 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 SH3GLB2Q9NR46 395 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 TCP11L1Q9NUJ3 509 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 BIN2Q9UBW5 565 aaPredicted RBP10.78□□□□□ -0.68
MSH3-203ENST00000512531 ZHX2Q9Y6X8 837 aa10.78□□□□□ -0.68
MSH3-203ENST00000512531 MGAMO43451 1857 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 FAM237AA0A1B0GTK4 181 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 A0A1B0GVL5 298 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 OFD1O75665 1012 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 MYCP01106 439 aaPredicted RBP10.77□□□□□ -0.69
MSH3-203ENST00000512531 CYP2C8P10632 490 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 PFKFB1P16118 471 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 NDUFA8P51970 172 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 PUS10Q3MIT2 529 aaKnown RBP10.77□□□□□ -0.69
MSH3-203ENST00000512531 C12orf60Q5U649 245 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 RESP18Q5W5W9 173 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 ADGRA1Q86SQ6 560 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 STK11IPQ8N1F8 1099 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 TRIML1Q8N9V2 468 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 ANKS1AQ92625 1134 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 MRFAP1L1Q96HT8 127 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 MYL10Q9BUA6 226 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 PAK6Q9NQU5 681 aaPredicted RBP10.77□□□□□ -0.69
MSH3-203ENST00000512531 AGTPBP1Q9UPW5 1226 aa10.77□□□□□ -0.69
MSH3-203ENST00000512531 VPS9D1Q9Y2B5 631 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms