RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 PPM1KQ8N3J5 372 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 OR2C3Q8N628 320 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 PPP1R35Q8TAP8 253 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 ZSCAN18Q8TBC5 510 aaPredicted RBP7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 ANKRD24Q8TF21 1146 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 RIPOR3Q96MK2 946 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 SDF4Q9BRK5 362 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 DISC1Q9NRI5 854 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 ABCF3Q9NUQ8 709 aa7.17□□□□□ -1.26
TRAPPC11-209ENST00000512476 LRRC9Q6ZRR7 1453 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 XPOTO43592 962 aaKnown RBP7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLC34A2O95436 690 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 GRIA2P42262 883 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 LIG3P49916 1009 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 GDF10P55107 478 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 SEMA3AQ14563 771 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 PPP2R5DQ14738 602 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 CCDC38Q502W7 563 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 FNDC3BQ53EP0 1204 aaKnown RBP7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 TPTE2Q6XPS3 522 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 MSANTD4Q8NCY6 345 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 CENPIQ92674 756 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 KLRG1Q96E93 195 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 ALPK1Q96QP1 1244 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 NTPCRQ9BSD7 190 aaKnown RBP7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 LATS2Q9NRM7 1088 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 DAGLAQ9Y4D2 1042 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 PCDHGA4Q9Y5G9 962 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 LRRIQ1Q96JM4 1722 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 CARMIL2Q6F5E8 1435 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 HECW1Q76N89 1606 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 FAM86C2PA6NEL3 165 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 GIPC1O14908 333 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 GADD45BO75293 160 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 BTF3P20290 206 aaKnown RBP7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 ELOA2Q8IYF1 753 aaPredicted RBP7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 VPS52Q8N1B4 723 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLC26A8Q96RN1 970 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 EHMT1Q9H9B1 1298 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 ZSWIM5Q9P217 1185 aa7.16□□□□□ -1.26
TRAPPC11-209ENST00000512476 KPNA5O15131 536 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLC7A4O43246 635 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 KIF20AO95235 890 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 SOD2P04179 222 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 POU2F2P09086 479 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 GRIK1P39086 918 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 PIK3CBP42338 1070 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 NR1H2P55055 460 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 MRPL28Q13084 256 aaKnown RBP7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 WSCD2Q2TBF2 565 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 MMEL1Q495T6 779 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 ZNF362Q5T0B9 420 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 HGSNATQ68CP4 663 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 ISM2Q6H9L7 571 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 CHRDL2Q6WN34 429 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 DSTYKQ6XUX3 929 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 VSIG1Q86XK7 387 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 PTRH1Q86Y79 214 aaKnown RBP7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLC44A2Q8IWA5 706 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 NXPE1Q8N323 547 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 IPMKQ8NFU5 416 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 MYO19Q96H55 970 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 NT5C1BQ96P26 610 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 SUDS3Q9H7L9 328 aaPredicted RBP7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 WDR35Q9P2L0 1181 aa7.15□□□□□ -1.26
TRAPPC11-209ENST00000512476 SHROOM2Q13796 1616 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 ANKRD18BA2A2Z9 1011 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 CLTBP09497 229 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 ATP6V1B1P15313 513 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 GALNT1Q10472 559 aaPredicted RBP7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 RRP12Q5JTH9 1297 aaKnown RBP7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 IFIT1BQ5T764 474 aaKnown RBP7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 PDE12Q6L8Q7 609 aaKnown RBP7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 TATDN1Q6P1N9 297 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 NFXL1Q6ZNB6 911 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 C4orf50Q6ZRC1 276 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 BRAPQ7Z569 592 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 TREML1Q86YW5 311 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 GSDMBQ8TAX9 411 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 DEPTORQ8TB45 409 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 KHSRPQ92945 711 aaKnown RBP eCLIP7.15□□□□□ -1.272e-7■■■■■ 31.2
TRAPPC11-209ENST00000512476 SCLYQ96I15 445 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 AIFM3Q96NN9 605 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 POLR3CQ9BUI4 534 aaPredicted RBP7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 ETNK1Q9HBU6 452 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 INTS7Q9NVH2 962 aaKnown RBP7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 N6AMT1Q9Y5N5 214 aa7.15□□□□□ -1.27
TRAPPC11-209ENST00000512476 A0A087WV62 115 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 H2AFYO75367 372 aaKnown RBP7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 PAGE1O75459 146 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 GUCA1CO95843 209 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 ARAFP10398 606 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 RPS6KB1P23443 525 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 RECQLP46063 649 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 FCGRTP55899 365 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 IRX5P78411 483 aaPredicted RBP7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 PPP2R3AQ06190 1150 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 MORN1Q5T089 497 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 IQSEC1Q6DN90 963 aa7.14□□□□□ -1.27
TRAPPC11-209ENST00000512476 KLHL10Q6JEL2 608 aa7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms