RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 CCDC178Q5BJE1 867 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 GPATCH4Q5T3I0 446 aaKnown RBP6.82□□□□□ -1.32
RNF4-217ENST00000511892 SLC30A10Q6XR72 485 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 STOX1Q6ZVD7 989 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 SKAP1Q86WV1 359 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 IQCA1Q86XH1 822 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 FBXO16Q8IX29 292 aaPredicted RBP6.82□□□□□ -1.32
RNF4-217ENST00000511892 TDHQ8IZJ6 230 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 MORC4Q8TE76 937 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 TRIM43Q96BQ3 446 aaPredicted RBP6.82□□□□□ -1.32
RNF4-217ENST00000511892 KRT23Q9C075 422 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 UBE2OQ9C0C9 1292 aaKnown RBP6.82□□□□□ -1.32
RNF4-217ENST00000511892 UBA5Q9GZZ9 404 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 PDLIM7Q9NR12 457 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 PDGFCQ9NRA1 345 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 GNEQ9Y223 722 aaKnown RBP6.82□□□□□ -1.32
RNF4-217ENST00000511892 REV3LO60673 3130 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 VCANP13611 3396 aa6.82□□□□□ -1.32
RNF4-217ENST00000511892 TRANK1O15050 2925 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 WDR19Q8NEZ3 1342 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 RBM47A0AV96 593 aaKnown RBP6.81□□□□□ -1.32
RNF4-217ENST00000511892 MOXD2PA6NHM9 499 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 ASB14A6NK59 587 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 ASGR1P07306 291 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 C6orf222P0C671 652 aaPredicted RBP6.81□□□□□ -1.32
RNF4-217ENST00000511892 SMPD1P17405 629 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 CDK7P50613 346 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 ALDH5A1P51649 535 aaPredicted RBP6.81□□□□□ -1.32
RNF4-217ENST00000511892 BEX3Q00994 111 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 TNFAIP2Q03169 654 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 FAAP100Q0VG06 881 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 CDC37Q16543 378 aaPredicted RBP6.81□□□□□ -1.32
RNF4-217ENST00000511892 SLC35G1Q2M3R5 365 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 LRIT3Q3SXY7 679 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 USH1GQ495M9 461 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 EEPD1Q7L9B9 569 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 ANKRD33Q7Z3H0 272 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 ADGRF4Q8IZF3 695 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 STAG2Q8N3U4 1231 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 RUFY2Q8WXA3 655 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 TBC1D5Q92609 795 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 MAP4K1Q92918 833 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 BADQ92934 168 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 KAT14Q9H8E8 782 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 CNNM2Q9H8M5 875 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 JMJD4Q9H9V9 463 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 SENP2Q9HC62 589 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 PRDM5Q9NQX1 630 aaPredicted RBP6.81□□□□□ -1.32
RNF4-217ENST00000511892 CHD7Q9P2D1 2997 aa6.81□□□□□ -1.32
RNF4-217ENST00000511892 ELP1O95163 1332 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 PTPDC1A2A3K4 754 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 PALM3A6NDB9 673 aaPredicted RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 E7EWF7 191 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 KIAA0355O15063 1070 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 PQBP1O60828 265 aaKnown RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 CLTBP09497 229 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 PARP1P09874 1014 aaKnown RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 CALML3P27482 149 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 ANTXR2P58335 489 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 RPS6P62753 249 aaKnown RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 COL9A3Q14050 684 aaPredicted RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 QRICH1Q2TAL8 776 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 ASPRV1Q53RT3 343 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 GNASQ5JWF2 1037 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 PPP1R15BQ5SWA1 713 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 IFIT1BQ5T764 474 aaKnown RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 IQSEC1Q6DN90 963 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 RNF207Q6ZRF8 634 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 CHST3Q7LGC8 479 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 TLK2Q86UE8 772 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 PCSK9Q8NBP7 692 aaKnown RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 RGS22Q8NE09 1264 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 NUP133Q8WUM0 1156 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 WNT2BQ93097 391 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 MTMR8Q96EF0 704 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 TOX2Q96NM4 488 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 LBHD1Q9BQE6 289 aaPredicted RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 UBAC1Q9BSL1 405 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 LSG1Q9H089 658 aaKnown RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 VTA1Q9NP79 307 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 STARD7Q9NQZ5 370 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 ADD3Q9UEY8 706 aaKnown RBP6.8□□□□□ -1.32
RNF4-217ENST00000511892 PRKAG2Q9UGJ0 569 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 MAD2L2Q9UI95 211 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 PNMA2Q9UL42 364 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 Q9Y3F1 56 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 TET1Q8NFU7 2136 aa6.8□□□□□ -1.32
RNF4-217ENST00000511892 KAT6AQ92794 2004 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 GRIN2DO15399 1336 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 ABCB11O95342 1321 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 LOC102724159A0A0B4J2E5 919 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 KLRF2D3W0D1 207 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 ARVCFO00192 962 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 OPLAHO14841 1288 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 DYNC1LI2O43237 492 aaPredicted RBP6.79□□□□□ -1.32
RNF4-217ENST00000511892 PPP1R11O60927 126 aaPredicted RBP6.79□□□□□ -1.32
RNF4-217ENST00000511892 EDNRBP24530 442 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 EPHB4P54760 987 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 GRM4Q14833 912 aa6.79□□□□□ -1.32
RNF4-217ENST00000511892 PWP2Q15269 919 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms