RNA–Protein interactions for RNA: ENST00000511739.1

USP38-203, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 2

Gene USP38, Length 6,376 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-203ENST00000511739 FPGT-TNNI3KV9GXZ4 949 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 CDC42BPGQ6DT37 1551 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 MYO3AQ8NEV4 1616 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 ABCB4P21439 1286 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 PHEXP78562 749 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 TTBK2Q6IQ55 1244 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 ATP6V0A1Q93050 837 aa6.31□□□□□ -1.4
USP38-203ENST00000511739 TMEM247A6NEH6 219 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 ERVV-2B6SEH9 535 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 SPECC1L-ADORA2AF8WAN1 911 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 IRX4P78413 519 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 PSMD2Q13200 908 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 MYSM1Q5VVJ2 828 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 SLFN13Q68D06 897 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 DSTYKQ6XUX3 929 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 NUDT18Q6ZVK8 323 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 HDXQ7Z353 690 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 LRRC47Q8N1G4 583 aaKnown RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 PPM1KQ8N3J5 372 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 C7orf31Q8N865 590 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 ZNF653Q96CK0 615 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 PSDA5PKW4 1024 aaPredicted RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 GNGT2O14610 69 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 TRIM37O94972 964 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 PYGLP06737 847 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 SOX5P35711 763 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 ADCY8P40145 1251 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 STX1BP61266 288 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 ASPHQ12797 758 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 BFSP1Q12934 665 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 DALRD3Q5D0E6 543 aaKnown RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 DENND2CQ68D51 928 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 MIS18BP1Q6P0N0 1132 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 ZNF467Q7Z7K2 595 aaPredicted RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 CCNYQ8ND76 341 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 LRGUKQ96M69 825 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 RAB17Q9H0T7 212 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 SLAIN2Q9P270 581 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 FRMPD1Q5SYB0 1578 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 CUTAO60888 179 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 MYL3P08590 195 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 GOLGA8FQ08AF8 430 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 GOLGA8DPQ0D2H9 430 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 NFX1Q12986 1120 aaKnown RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 ARHGEF25Q86VW2 580 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 COA7Q96BR5 231 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 ORAI2Q96SN7 254 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 NLRC4Q9NPP4 1024 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 STAP2Q9UGK3 403 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 ARHGAP6O43182 974 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 CIITAP33076 1130 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 PPP2R3AQ06190 1150 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 FAM196AQ6ZSG2 479 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 TAB3Q8N5C8 712 aaPredicted RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 SPDL1Q96EA4 605 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 DBNDD2Q9BQY9 259 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 LSM14BQ9BX40 385 aaKnown RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 TM6SF1Q9BZW5 370 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 TSKSQ9UJT2 592 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 TECPR2O15040 1411 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 ZNF532Q9HCE3 1301 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 HNRNPDLO14979 420 aaKnown RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 STX2P32856 288 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 VPS41P49754 854 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 PDE1BQ01064 536 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 THOC5Q13769 683 aaKnown RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 SZRD1Q7Z422 152 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 ANKRD42Q8N9B4 389 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 LZICQ8WZA0 190 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 RPGRIP1Q96KN7 1286 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 MYL10Q9BUA6 226 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 TAB2Q9NYJ8 693 aa6.3□□□□□ -1.4
USP38-203ENST00000511739 FARP1Q9Y4F1 1045 aaPredicted RBP6.3□□□□□ -1.4
USP38-203ENST00000511739 hCG_1642624A0A1W2PR95 340 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 SGSM2O43147 1006 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 RNF40O75150 1001 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 MTMR3Q13615 1198 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 NOLC1Q14978 699 aaKnown RBP eCLIP6.29□□□□□ -1.4
USP38-203ENST00000511739 CFAP221Q4G0U5 840 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 KAZNQ674X7 775 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 B4GALNT4Q76KP1 1039 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 RRAGAQ7L523 313 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 SIX6OS1Q8N1H7 587 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 DNAAF3Q8N9W5 541 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 ARHGEF1Q92888 912 aaKnown RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 EXOC4Q96A65 974 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 CCDC124Q96CT7 223 aaKnown RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 PSMB7Q99436 277 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 SUGT1Q9Y2Z0 365 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 PPEF1O14829 653 aaPredicted RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 BTDP43251 543 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 NSFP46459 744 aaKnown RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 GTF2A1P52655 376 aaPredicted RBP6.29□□□□□ -1.4
USP38-203ENST00000511739 POSTNQ15063 836 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 CAPN12Q6ZSI9 719 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 EEPD1Q7L9B9 569 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 MYOCDQ8IZQ8 938 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 MGARPQ8TDB4 240 aa6.29□□□□□ -1.4
USP38-203ENST00000511739 NELFBQ8WX92 580 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms