RNA–Protein interactions for RNA: ENST00000511732.1

COL1A1-213, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-213ENST00000511732 MAF1Q9H063 256 aa17.84■□□□□ 0.45
COL1A1-213ENST00000511732 MRPL11Q9Y3B7 192 aaKnown RBP17.84■□□□□ 0.45
COL1A1-213ENST00000511732 SCN10AQ9Y5Y9 1956 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 IFIT3O14879 490 aaKnown RBP17.83■□□□□ 0.44
COL1A1-213ENST00000511732 NKRFO15226 690 aaKnown RBP eCLIP17.83■□□□□ 0.44
COL1A1-213ENST00000511732 CPT1AP50416 773 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 ANTXR2P58335 489 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 GRM4Q14833 912 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 CCDC62Q6P9F0 684 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 MCF2L2Q86YR7 1114 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 TMEM199Q8N511 208 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 NCOA7Q8NI08 942 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 PPP1R13LQ8WUF5 828 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 AMNQ9BXJ7 453 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 ALDH8A1Q9H2A2 487 aaPredicted RBP17.83■□□□□ 0.44
COL1A1-213ENST00000511732 HIPK3Q9H422 1215 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 POLR3EQ9NVU0 708 aa17.83■□□□□ 0.44
COL1A1-213ENST00000511732 CDH23Q9H251 3354 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 A6NJR5 290 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 B4DLN1 442 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 ZBTB5O15062 677 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 CYTH3O43739 400 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 CFBP00751 764 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 MRPL12P52815 198 aaKnown RBP17.82■□□□□ 0.44
COL1A1-213ENST00000511732 TROAPQ12815 778 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 TTLL4Q14679 1199 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 RASIP1Q5U651 963 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 SEPT14Q6ZU15 432 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 ZNF365Q70YC5 407 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 SKAP1Q86WV1 359 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 MB21D2Q8IYB1 491 aaPredicted RBP17.82■□□□□ 0.44
COL1A1-213ENST00000511732 NSUN6Q8TEA1 469 aaKnown RBP17.82■□□□□ 0.44
COL1A1-213ENST00000511732 RMDN3Q96TC7 470 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 CDX2Q99626 313 aaPredicted RBP17.82■□□□□ 0.44
COL1A1-213ENST00000511732 MTG1Q9BT17 334 aaPredicted RBP17.82■□□□□ 0.44
COL1A1-213ENST00000511732 NOC4LQ9BVI4 516 aaKnown RBP17.82■□□□□ 0.44
COL1A1-213ENST00000511732 SEZ6LQ9BYH1 1024 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 RIOX1Q9H6W3 641 aa17.82■□□□□ 0.44
COL1A1-213ENST00000511732 TRMT13Q9NUP7 481 aaKnown RBP17.82■□□□□ 0.44
COL1A1-213ENST00000511732 RBM8AQ9Y5S9 174 aaKnown RBP17.82■□□□□ 0.44
COL1A1-213ENST00000511732 EIF2AK2P19525 551 aaKnown RBP17.81■□□□□ 0.44
COL1A1-213ENST00000511732 HSD17B4P51659 736 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 CCL23P55773 120 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 GHRHRQ02643 423 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 COL9A3Q14050 684 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-213ENST00000511732 WTAPQ15007 396 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 LY6KQ17RY6 165 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 RALYLQ86SE5 291 aaKnown RBP17.81■□□□□ 0.44
COL1A1-213ENST00000511732 HOMER1Q86YM7 354 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 IGDCC4Q8TDY8 1250 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 VWCEQ96DN2 955 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 PIGSQ96S52 555 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 WNT8AQ9H1J5 351 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 IL23AQ9NPF7 189 aa17.81■□□□□ 0.44
COL1A1-213ENST00000511732 BAZ2BQ9UIF8 2168 aaKnown RBP17.8■□□□□ 0.44
COL1A1-213ENST00000511732 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-213ENST00000511732 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-213ENST00000511732 GRXCR1A8MXD5 290 aa17.8■□□□□ 0.44
COL1A1-213ENST00000511732 STXBP2Q15833 593 aa17.8■□□□□ 0.44
COL1A1-213ENST00000511732 NBPF20Q3BBV1 942 aa17.8■□□□□ 0.44
COL1A1-213ENST00000511732 ARHGEF16Q5VV41 709 aa17.8■□□□□ 0.44
COL1A1-213ENST00000511732 IWS1Q96ST2 819 aa17.8■□□□□ 0.44
COL1A1-213ENST00000511732 LSG1Q9H089 658 aaKnown RBP17.8■□□□□ 0.44
COL1A1-213ENST00000511732 GPHNQ9NQX3 736 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-213ENST00000511732 PXMP2Q9NR77 195 aa17.8■□□□□ 0.44
COL1A1-213ENST00000511732 PCDHA1Q9Y5I3 950 aa17.8■□□□□ 0.44
COL1A1-213ENST00000511732 ERICH2A1L162 156 aa17.79■□□□□ 0.44
COL1A1-213ENST00000511732 NR3C2P08235 984 aa17.79■□□□□ 0.44
COL1A1-213ENST00000511732 CYP2C9P11712 490 aa17.79■□□□□ 0.44
COL1A1-213ENST00000511732 ARHGAP1Q07960 439 aa17.79■□□□□ 0.44
COL1A1-213ENST00000511732 TMEM67Q5HYA8 995 aa17.79■□□□□ 0.44
COL1A1-213ENST00000511732 PSRC1Q6PGN9 363 aaPredicted RBP17.79■□□□□ 0.44
COL1A1-213ENST00000511732 AFG1LQ8WV93 481 aa17.79■□□□□ 0.44
COL1A1-213ENST00000511732 SCLYQ96I15 445 aa17.79■□□□□ 0.44
COL1A1-213ENST00000511732 CXXC1Q9P0U4 656 aaPredicted RBP17.79■□□□□ 0.44
COL1A1-213ENST00000511732 DDX41Q9UJV9 622 aaKnown RBP17.79■□□□□ 0.44
COL1A1-213ENST00000511732 SCN5AQ14524 2016 aa17.78■□□□□ 0.44
COL1A1-213ENST00000511732 MMP3P08254 477 aa17.78■□□□□ 0.44
COL1A1-213ENST00000511732 DNAJB2P25686 324 aa17.78■□□□□ 0.44
COL1A1-213ENST00000511732 HOXA13P31271 388 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-213ENST00000511732 PBX2P40425 430 aa17.78■□□□□ 0.44
COL1A1-213ENST00000511732 BRDTQ58F21 947 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-213ENST00000511732 MYLIPQ8WY64 445 aa17.78■□□□□ 0.44
COL1A1-213ENST00000511732 MYH7BA7E2Y1 1941 aa17.78■□□□□ 0.44
COL1A1-213ENST00000511732 GBF1Q92538 1859 aa17.78■□□□□ 0.44
COL1A1-213ENST00000511732 KPNA6O60684 536 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 EIF3JO75822 258 aaKnown RBP17.77■□□□□ 0.44
COL1A1-213ENST00000511732 RGS20O76081 388 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 GH1P01241 217 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 SART3Q15020 963 aaKnown RBP17.77■□□□□ 0.44
COL1A1-213ENST00000511732 FAM47CQ5HY64 1035 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 HERVK_113Q902F9 699 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 PDCD2LQ9BRP1 358 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 ESYT1Q9BSJ8 1104 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 MYL10Q9BUA6 226 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 PBX4Q9BYU1 374 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 LY9Q9HBG7 655 aa17.77■□□□□ 0.44
COL1A1-213ENST00000511732 MAP3K20Q9NYL2 800 aaKnown RBP17.77■□□□□ 0.44
COL1A1-213ENST00000511732 TMEM265A0A087WTH1 108 aa17.76■□□□□ 0.43
COL1A1-213ENST00000511732 PNMA6FA0A0J9YX94 578 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms