RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 MAGOHBQ96A72 148 aaKnown RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 CCDC138Q96M89 665 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 LRWD1Q9UFC0 647 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 SYNGAP1Q96PV0 1343 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 KRT37O76014 449 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 SERPING1P05155 500 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 CYP2C19P33261 490 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 HNRNPH2P55795 449 aaKnown RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 BRDTQ58F21 947 aaPredicted RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 ZNF653Q96CK0 615 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 MRPL47Q9HD33 250 aaKnown RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 PSMD6Q15008 389 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 ARL6IP4Q66PJ3 421 aaKnown RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 HACE1Q8IYU2 909 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 GOLGA8IPA6NC78 632 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 CDR2Q01850 454 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 CRLF3Q8IUI8 442 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 TUBGCP2Q9BSJ2 902 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 SLC26A4O43511 780 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 DTX3LQ8TDB6 740 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 FGD4Q96M96 766 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 BLOC1S6Q9UL45 172 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 GCNT3O95395 438 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 KRT16P08779 473 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 CCND1P24385 295 aa9.07□□□□□ -0.96
HTT-208ENST00000510626 CDCA7Q9BWT1 371 aaPredicted RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 V9GY48 417 aaPredicted RBP9.07□□□□□ -0.96
HTT-208ENST00000510626 SMAPO00193 183 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 CABP7Q86V35 215 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 GOLGA8MH3BSY2 632 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 NEK8Q86SG6 692 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 ZC3H18Q86VM9 953 aaKnown RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 PARVBQ9HBI1 364 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 PRPSAP1Q14558 356 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 SLFN14P0C7P3 912 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 MSH2P43246 934 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 RNASE9P60153 205 aaKnown RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 MDM2Q00987 491 aaPredicted RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 TRIM50Q86XT4 487 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 SNX29Q8TEQ0 813 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 U2AF1L4Q8WU68 220 aaKnown RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 AP1B1Q10567 949 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 KRT4P19013 534 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 TRAIPQ9BWF2 469 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 SETD1BQ9UPS6 1966 aaKnown RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 C6orf229H3BNL8 230 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 SFSWAPQ12872 951 aaKnown RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 SLITRK6Q9H5Y7 841 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 KLC4Q9NSK0 619 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 MFAP3P55082 362 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 EIF4A2Q14240 407 aaKnown RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 AKNAD1Q5T1N1 836 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 ZNF658Q5TYW1 1059 aaPredicted RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 ARHGEF10LQ9HCE6 1279 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 EPB41L5Q9HCM4 733 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 PA2G4Q9UQ80 394 aaKnown RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 FOSP01100 380 aaPredicted RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 DAB2IPQ5VWQ8 1189 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 POTEAQ6S8J7 498 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 SYDE1Q6ZW31 735 aaPredicted RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 ABTB1Q969K4 478 aaPredicted RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 TRIM56Q9BRZ2 755 aaKnown RBP9.06□□□□□ -0.96
HTT-208ENST00000510626 FAM83GA6ND36 823 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 SSH3Q8TE77 659 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 POLE2P56282 527 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 CUL3Q13618 768 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 MAN2A1Q16706 1144 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 SLC35F6Q8N357 371 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 EYA3Q99504 573 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 PITPNM3Q9BZ71 974 aa9.06□□□□□ -0.96
HTT-208ENST00000510626 CYLC2Q14093 348 aaPredicted RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 SH3GLB2Q9NR46 395 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 POLKQ9UBT6 870 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 EXOC5O00471 708 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 FOXP3Q9BZS1 431 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 MAST1Q9Y2H9 1570 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 MBD4O95243 580 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 EHHADHQ08426 723 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 LRMPQ12912 555 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 MYO1FO00160 1098 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 RAB15P59190 212 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 POLR3CQ9BUI4 534 aaPredicted RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 RNF26Q9BY78 433 aaPredicted RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 ANAPC5Q9UJX4 755 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 SYCP2Q9BX26 1530 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 GRIN2AQ12879 1464 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 MCF2LO15068 1137 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 PSPC1Q8WXF1 523 aaKnown RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 POP5Q969H6 163 aaKnown RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 MYCT1Q8N699 235 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 KDRP35968 1356 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 HEXIM1O94992 359 aaKnown RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 CACTINQ8WUQ7 758 aaKnown RBP9.05□□□□□ -0.96
HTT-208ENST00000510626 GPR108Q9NPR9 543 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 CD109Q6YHK3 1445 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 NDUFA10O95299 355 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 BFSP1Q12934 665 aa9.05□□□□□ -0.96
HTT-208ENST00000510626 AGGF1Q8N302 714 aaeCLIP9.05□□□□□ -0.961e-23■■■■■ 126.7
HTT-208ENST00000510626 SETDB2Q96T68 719 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms