RNA–Protein interactions for RNA: ENST00000509748.1

LIN54-208, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 5

Gene LIN54, Length 729 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-208ENST00000509748 CREB3L3Q68CJ9 461 aa24.67■■□□□ 1.54
LIN54-208ENST00000509748 CCDC62Q6P9F0 684 aa24.67■■□□□ 1.54
LIN54-208ENST00000509748 NSUN6Q8TEA1 469 aaKnown RBP24.67■■□□□ 1.54
LIN54-208ENST00000509748 PIGSQ96S52 555 aa24.67■■□□□ 1.54
LIN54-208ENST00000509748 RMDN3Q96TC7 470 aa24.67■■□□□ 1.54
LIN54-208ENST00000509748 MTA3Q9BTC8 594 aa24.67■■□□□ 1.54
LIN54-208ENST00000509748 NKRFO15226 690 aaKnown RBP eCLIP24.66■■□□□ 1.543e-9■■□□□ 13.5
LIN54-208ENST00000509748 PSMC6P62333 389 aa24.66■■□□□ 1.54
LIN54-208ENST00000509748 Q7L0L9 218 aa24.66■■□□□ 1.54
LIN54-208ENST00000509748 IWS1Q96ST2 819 aa24.66■■□□□ 1.54
LIN54-208ENST00000509748 PCDHA1Q9Y5I3 950 aa24.66■■□□□ 1.54
LIN54-208ENST00000509748 KIAA1217Q5T5P2 1943 aa24.65■■□□□ 1.54
LIN54-208ENST00000509748 PRC1O43663 620 aa24.65■■□□□ 1.54
LIN54-208ENST00000509748 CFBP00751 764 aa24.65■■□□□ 1.54
LIN54-208ENST00000509748 PURAQ00577 322 aaKnown RBP24.65■■□□□ 1.54
LIN54-208ENST00000509748 FPGSQ05932 587 aa24.65■■□□□ 1.54
LIN54-208ENST00000509748 PPP2R5BQ15173 497 aa24.65■■□□□ 1.54
LIN54-208ENST00000509748 CATIPQ7Z7H3 387 aa24.65■■□□□ 1.54
LIN54-208ENST00000509748 OR6J1Q8NGC5 347 aa24.65■■□□□ 1.54
LIN54-208ENST00000509748 SCN10AQ9Y5Y9 1956 aa24.64■■□□□ 1.54
LIN54-208ENST00000509748 A6NJR5 290 aa24.64■■□□□ 1.54
LIN54-208ENST00000509748 TXNP10599 105 aaKnown RBP24.64■■□□□ 1.54
LIN54-208ENST00000509748 MFSD5Q6N075 450 aa24.64■■□□□ 1.54
LIN54-208ENST00000509748 HOMER1Q86YM7 354 aa24.64■■□□□ 1.54
LIN54-208ENST00000509748 DEFB123Q8N688 67 aa24.64■■□□□ 1.54
LIN54-208ENST00000509748 MAP3K14Q99558 947 aa24.64■■□□□ 1.54
LIN54-208ENST00000509748 SEZ6LQ9BYH1 1024 aa24.64■■□□□ 1.54
LIN54-208ENST00000509748 ANO2Q9NQ90 1003 aa24.64■■□□□ 1.54
LIN54-208ENST00000509748 PXMP2Q9NR77 195 aa24.64■■□□□ 1.54
LIN54-208ENST00000509748 PNMA6FA0A0J9YX94 578 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 SH2B2O14492 632 aaPredicted RBP24.63■■□□□ 1.53
LIN54-208ENST00000509748 TLR3O15455 904 aaKnown RBP24.63■■□□□ 1.53
LIN54-208ENST00000509748 MCM5P33992 734 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 CPT1AP50416 773 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 TTLL4Q14679 1199 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 STXBP2Q15833 593 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 C16orf59Q7L2K0 433 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 ZNF654Q8IZM8 581 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 MYL10Q9BUA6 226 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 POLR3EQ9NVU0 708 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 MAP3K20Q9NYL2 800 aaKnown RBP24.63■■□□□ 1.53
LIN54-208ENST00000509748 COL6A3P12111 3177 aa24.63■■□□□ 1.53
LIN54-208ENST00000509748 NR3C2P08235 984 aa24.62■■□□□ 1.53
LIN54-208ENST00000509748 EIF2AK2P19525 551 aaKnown RBP24.62■■□□□ 1.53
LIN54-208ENST00000509748 ARHGEF16Q5VV41 709 aa24.62■■□□□ 1.53
LIN54-208ENST00000509748 SEPT14Q6ZU15 432 aa24.62■■□□□ 1.53
LIN54-208ENST00000509748 SAMD3Q8N6K7 520 aa24.62■■□□□ 1.53
LIN54-208ENST00000509748 TRPV6Q9H1D0 765 aa24.62■■□□□ 1.53
LIN54-208ENST00000509748 MTMR10Q9NXD2 777 aa24.62■■□□□ 1.53
LIN54-208ENST00000509748 DDAH1O94760 285 aa24.61■■□□□ 1.53
LIN54-208ENST00000509748 MYL3P08590 195 aa24.61■■□□□ 1.53
LIN54-208ENST00000509748 HOXA13P31271 388 aaPredicted RBP24.61■■□□□ 1.53
LIN54-208ENST00000509748 FAM109BQ6ICB4 259 aaPredicted RBP24.61■■□□□ 1.53
LIN54-208ENST00000509748 CASC1Q6TDU7 716 aa24.61■■□□□ 1.53
LIN54-208ENST00000509748 TMEM87BQ96K49 555 aa24.61■■□□□ 1.53
LIN54-208ENST00000509748 B4GALT4O60513 344 aa24.6■■□□□ 1.53
LIN54-208ENST00000509748 EIF3JO75822 258 aaKnown RBP24.6■■□□□ 1.53
LIN54-208ENST00000509748 LIFRP42702 1097 aa24.6■■□□□ 1.53
LIN54-208ENST00000509748 ARHGAP1Q07960 439 aa24.6■■□□□ 1.53
LIN54-208ENST00000509748 LY6KQ17RY6 165 aa24.6■■□□□ 1.53
LIN54-208ENST00000509748 PDCD2LQ9BRP1 358 aa24.6■■□□□ 1.53
LIN54-208ENST00000509748 MTG1Q9BT17 334 aaPredicted RBP24.6■■□□□ 1.53
LIN54-208ENST00000509748 SPZ1Q9BXG8 430 aa24.6■■□□□ 1.53
LIN54-208ENST00000509748 PPP1R12CQ9BZL4 782 aa24.6■■□□□ 1.53
LIN54-208ENST00000509748 ALDH8A1Q9H2A2 487 aaPredicted RBP24.6■■□□□ 1.53
LIN54-208ENST00000509748 RGS20O76081 388 aa24.59■■□□□ 1.53
LIN54-208ENST00000509748 CSF2RAP15509 400 aa24.59■■□□□ 1.53
LIN54-208ENST00000509748 SMARCA1P28370 1054 aa24.59■■□□□ 1.53
LIN54-208ENST00000509748 CYP2C18P33260 490 aa24.59■■□□□ 1.53
LIN54-208ENST00000509748 TRAF1Q13077 416 aa24.59■■□□□ 1.53
LIN54-208ENST00000509748 TMTC2Q8N394 836 aa24.59■■□□□ 1.53
LIN54-208ENST00000509748 DDX41Q9UJV9 622 aaKnown RBP24.59■■□□□ 1.53
LIN54-208ENST00000509748 UMODL1Q5DID0 1318 aa24.59■■□□□ 1.53
LIN54-208ENST00000509748 KPNA6O60684 536 aa24.58■■□□□ 1.53
LIN54-208ENST00000509748 VSIG10LQ86VR7 867 aa24.58■■□□□ 1.53
LIN54-208ENST00000509748 IL31RAQ8NI17 732 aa24.58■■□□□ 1.53
LIN54-208ENST00000509748 RNPC3Q96LT9 517 aaKnown RBP24.58■■□□□ 1.53
LIN54-208ENST00000509748 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.58■■□□□ 1.539e-13■■■■■ 34.7
LIN54-208ENST00000509748 NOC4LQ9BVI4 516 aaKnown RBP24.58■■□□□ 1.53
LIN54-208ENST00000509748 LRRC2Q9BYS8 371 aa24.58■■□□□ 1.53
LIN54-208ENST00000509748 GCOM1H8Y6P7 765 aaPredicted RBP24.57■■□□□ 1.52
LIN54-208ENST00000509748 CDC45O75419 566 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 PLEKHA8P1O95397 391 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 GH1P01241 217 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 POLR2MP0CAP2 368 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 SMAD3P84022 425 aaKnown RBP24.57■■□□□ 1.52
LIN54-208ENST00000509748 PPIGQ13427 754 aaKnown RBP eCLIP24.57■■□□□ 1.52
LIN54-208ENST00000509748 PGM5Q15124 567 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 NBPF20Q3BBV1 942 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 BRDTQ58F21 947 aaPredicted RBP24.57■■□□□ 1.52
LIN54-208ENST00000509748 TMEM240Q5SV17 173 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 RASEFQ8IZ41 740 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 SRBD1Q8N5C6 995 aaKnown RBP24.57■■□□□ 1.52
LIN54-208ENST00000509748 CTCFLQ8NI51 663 aaPredicted RBP24.57■■□□□ 1.52
LIN54-208ENST00000509748 AFG1LQ8WV93 481 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 PIBF1Q8WXW3 757 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 HIPK3Q9H422 1215 aa24.57■■□□□ 1.52
LIN54-208ENST00000509748 TRMT13Q9NUP7 481 aaKnown RBP24.57■■□□□ 1.52
LIN54-208ENST00000509748 RXRAP19793 462 aa24.56■■□□□ 1.52
LIN54-208ENST00000509748 KIF5BP33176 963 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms