RNA–Protein interactions for RNA: ENST00000509618.1

HTT-206, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-206ENST00000509618 DDX11Q96FC9 970 aa5.9□□□□□ -1.46
HTT-206ENST00000509618 TEX13BQ9BXU2 312 aa5.9□□□□□ -1.46
HTT-206ENST00000509618 SPC25Q9HBM1 224 aa5.9□□□□□ -1.46
HTT-206ENST00000509618 A1CFQ9NQ94 594 aaKnown RBP5.9□□□□□ -1.46
HTT-206ENST00000509618 ZBTB40Q9NUA8 1239 aa5.9□□□□□ -1.46
HTT-206ENST00000509618 DBNLQ9UJU6 430 aaKnown RBP5.9□□□□□ -1.46
HTT-206ENST00000509618 EXOC6BQ9Y2D4 811 aa5.9□□□□□ -1.46
HTT-206ENST00000509618 SSUH2Q9Y2M2 353 aa5.9□□□□□ -1.46
HTT-206ENST00000509618 NOP58Q9Y2X3 529 aaKnown RBP5.9□□□□□ -1.46
HTT-206ENST00000509618 FPGT-TNNI3KV9GXZ4 949 aa5.9□□□□□ -1.46
HTT-206ENST00000509618 FRYLO94915 3013 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 LOC730098B7Z3J9 87 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 KIF28PB7ZC32 967 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 GRM6O15303 877 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 GALR2O43603 387 aaPredicted RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 RAD21O60216 631 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 CABYRO75952 493 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 BAIAP3O94812 1187 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 GLP2RO95838 553 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 NDUFB10O96000 172 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 POLR3DP05423 398 aaPredicted RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 ACTN1P12814 892 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 SP100P23497 879 aaPredicted RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 KCNJ6P48051 423 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 RRP1P56182 461 aaKnown RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 ZNF200P98182 395 aaPredicted RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 SMAD4Q13485 552 aaKnown RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 CAMK1Q14012 370 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 TRIM71Q2Q1W2 868 aaKnown RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 MUM1L1Q5H9M0 696 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 GDF6Q6KF10 455 aaPredicted RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.89□□□□□ -1.47
HTT-206ENST00000509618 ADGRD2Q7Z7M1 963 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 AACSQ86V21 672 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 IFNLR1Q8IU57 520 aaPredicted RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 FEZF2Q8TBJ5 459 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 SP7Q8TDD2 431 aaPredicted RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 MSLNLQ96KJ4 702 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 RAD9AQ99638 391 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 SLF1Q9BQI6 1058 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 ZBED2Q9BTP6 218 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 DCP1AQ9NPI6 582 aaPredicted RBP5.89□□□□□ -1.47
HTT-206ENST00000509618 GPR108Q9NPR9 543 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 INCENPQ9NQS7 918 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 MCM9Q9NXL9 1143 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 CLEC1BQ9P126 229 aa5.89□□□□□ -1.47
HTT-206ENST00000509618 GREB1LQ9C091 1923 aaPredicted RBP5.88□□□□□ -1.47
HTT-206ENST00000509618 PITPNM1O00562 1244 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 RAB11FIP3O75154 756 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 ARIH2O95376 493 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 CXCL10P02778 98 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 IFIT2P09913 472 aaKnown RBP5.88□□□□□ -1.47
HTT-206ENST00000509618 DNAJB1P25685 340 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 RFC2P35250 354 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 CHMP4BP1P59074 171 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 HTRA4P83105 476 aaPredicted RBP5.88□□□□□ -1.47
HTT-206ENST00000509618 SIGLEC14Q08ET2 396 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 GPM6BQ13491 265 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 CBX2Q14781 532 aaPredicted RBP5.88□□□□□ -1.47
HTT-206ENST00000509618 PUS10Q3MIT2 529 aaKnown RBP5.88□□□□□ -1.47
HTT-206ENST00000509618 TIGD5Q53EQ6 642 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 LRRC8DQ7L1W4 858 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 TTC6Q86TZ1 520 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 ANKRD35Q8N283 1001 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 CLASRPQ8N2M8 674 aaKnown RBP5.88□□□□□ -1.47
HTT-206ENST00000509618 VN1R2Q8NFZ6 395 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 RHPN1Q8TCX5 695 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 KIFC2Q96AC6 838 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 KIF1BPQ96EK5 621 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 AP5M1Q9H0R1 490 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 CCDC8Q9H0W5 538 aaPredicted RBP5.88□□□□□ -1.47
HTT-206ENST00000509618 NSUN3Q9H649 340 aaKnown RBP5.88□□□□□ -1.47
HTT-206ENST00000509618 IGFLR1Q9H665 355 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 ARHGEF10LQ9HCE6 1279 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 IL1RAPL2Q9NP60 686 aa5.88□□□□□ -1.47
HTT-206ENST00000509618 BARX2Q9UMQ3 279 aaPredicted RBP5.88□□□□□ -1.47
HTT-206ENST00000509618 TCRBV5S4A2TA0A5A2 114 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 H3BNC9 293 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 ATP2A1O14983 1001 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 CDK8P49336 464 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 CNKSR3Q6P9H4 555 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 DGLUCYQ7Z3D6 616 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 FBXO11Q86XK2 927 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 KIAA2013Q8IYS2 634 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 MYOCDQ8IZQ8 938 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 STK11IPQ8N1F8 1099 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 KAT2BQ92831 832 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 EAF2Q96CJ1 260 aaPredicted RBP5.87□□□□□ -1.47
HTT-206ENST00000509618 RPGRIP1Q96KN7 1286 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 UPF3BQ9BZI7 483 aaKnown RBP5.87□□□□□ -1.47
HTT-206ENST00000509618 ARMT1Q9H993 441 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 SLC38A10Q9HBR0 1119 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 CD207Q9UJ71 328 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 USP15Q9Y4E8 981 aaPredicted RBP5.87□□□□□ -1.47
HTT-206ENST00000509618 FAM208BQ5VWN6 2430 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 CEP295Q9C0D2 2601 aa5.87□□□□□ -1.47
HTT-206ENST00000509618 TRIP12Q14669 1992 aaPredicted RBP5.86□□□□□ -1.47
HTT-206ENST00000509618 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.86□□□□□ -1.47
HTT-206ENST00000509618 SUPT20HL2P0C7V6 817 aa5.86□□□□□ -1.47
HTT-206ENST00000509618 CKBP12277 381 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms