RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 SSR1P43307 286 aaKnown RBP5.62□□□□□ -1.51
NIPBL-206ENST00000509429 GYS2P54840 703 aa5.62□□□□□ -1.51
NIPBL-206ENST00000509429 ZKSCAN8Q15776 578 aaPredicted RBP5.62□□□□□ -1.51
NIPBL-206ENST00000509429 TAF3Q5VWG9 929 aa5.62□□□□□ -1.51
NIPBL-206ENST00000509429 IGDCC4Q8TDY8 1250 aa5.62□□□□□ -1.51
NIPBL-206ENST00000509429 ANKRD24Q8TF21 1146 aa5.62□□□□□ -1.51
NIPBL-206ENST00000509429 ZBTB8AQ96BR9 441 aa5.62□□□□□ -1.51
NIPBL-206ENST00000509429 ERVK13-1Q9NX77 482 aa5.62□□□□□ -1.51
NIPBL-206ENST00000509429 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.62□□□□□ -1.51
NIPBL-206ENST00000509429 PATE3B3GLJ2 98 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 TNNI2P48788 182 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 RGS3P49796 1198 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 CCDC142Q17RM4 750 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 C11orf96Q7Z7L8 435 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 CREBRFQ8IUR6 639 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 RAI14Q9P0K7 980 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 SWAP70Q9UH65 585 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 FBXO9Q9UK97 447 aaPredicted RBP5.61□□□□□ -1.51
NIPBL-206ENST00000509429 SYNPO2Q9UMS6 1093 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 USTQ9Y2C2 406 aa5.61□□□□□ -1.51
NIPBL-206ENST00000509429 hCG_2014768A0A024R1R8 64 aa5.6□□□□□ -1.51
NIPBL-206ENST00000509429 UPK3BL1B0FP48 263 aa5.6□□□□□ -1.51
NIPBL-206ENST00000509429 UPK3BL2E5RIL1 263 aa5.6□□□□□ -1.51
NIPBL-206ENST00000509429 WDHD1O75717 1129 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-206ENST00000509429 ONECUT2O95948 504 aa5.6□□□□□ -1.51
NIPBL-206ENST00000509429 CEBPAP49715 358 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-206ENST00000509429 POU5F1Q01860 360 aaKnown RBP5.6□□□□□ -1.51
NIPBL-206ENST00000509429 MAP2K1Q02750 393 aaPredicted RBP5.6□□□□□ -1.51
NIPBL-206ENST00000509429 DPH6Q7L8W6 267 aa5.6□□□□□ -1.51
NIPBL-206ENST00000509429 PLEKHH3Q7Z736 793 aa5.6□□□□□ -1.51
NIPBL-206ENST00000509429 SMARCC2Q8TAQ2 1214 aa5.6□□□□□ -1.51
NIPBL-206ENST00000509429 YY1AP1Q9H869 796 aa5.6□□□□□ -1.51
NIPBL-206ENST00000509429 WWC3Q9ULE0 1092 aa5.6□□□□□ -1.51
NIPBL-206ENST00000509429 TMA7Q9Y2S6 64 aaKnown RBP5.6□□□□□ -1.51
NIPBL-206ENST00000509429 SBNO2Q9Y2G9 1366 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 A0A1W2PQ27 194 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 A0A1W2PQ64 194 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 A0A1W2PQC6 194 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 A0A1W2PQD8 194 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 ZNF623O75123 536 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 ENDOUP21128 410 aaKnown RBP5.59□□□□□ -1.51
NIPBL-206ENST00000509429 YARSP54577 528 aaKnown RBP5.59□□□□□ -1.51
NIPBL-206ENST00000509429 IGBP1P78318 339 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 NAALADL2Q58DX5 795 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 FAM13CQ8NE31 585 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 ZCRB1Q8TBF4 217 aaKnown RBP5.59□□□□□ -1.51
NIPBL-206ENST00000509429 ALG3Q92685 438 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 SCYL1Q96KG9 808 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 JMJD8Q96S16 334 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 CHPF2Q9P2E5 772 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 GABBR1Q9UBS5 961 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 NRBP1Q9UHY1 535 aa5.59□□□□□ -1.51
NIPBL-206ENST00000509429 F8W031 263 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-206ENST00000509429 B4GALT3O60512 393 aa5.58□□□□□ -1.52
NIPBL-206ENST00000509429 FAM200BP0CF97 657 aa5.58□□□□□ -1.52
NIPBL-206ENST00000509429 FBLP22087 321 aaKnown RBP5.58□□□□□ -1.52
NIPBL-206ENST00000509429 RPL13P26373 211 aaKnown RBP5.58□□□□□ -1.52
NIPBL-206ENST00000509429 KRTAP10-6P60371 365 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-206ENST00000509429 ZRSR2Q15696 482 aaKnown RBP5.58□□□□□ -1.52
NIPBL-206ENST00000509429 PTPROQ16827 1216 aa5.58□□□□□ -1.52
NIPBL-206ENST00000509429 ICE2Q659A1 982 aa5.58□□□□□ -1.52
NIPBL-206ENST00000509429 RNF207Q6ZRF8 634 aa5.58□□□□□ -1.52
NIPBL-206ENST00000509429 PCGF5Q86SE9 256 aa5.58□□□□□ -1.52
NIPBL-206ENST00000509429 NOP9Q86U38 636 aaKnown RBP5.58□□□□□ -1.52
NIPBL-206ENST00000509429 CCDC146Q8IYE0 955 aa5.58□□□□□ -1.52
NIPBL-206ENST00000509429 ZNF513Q8N8E2 541 aaPredicted RBP5.58□□□□□ -1.52
NIPBL-206ENST00000509429 LINC00482Q8N8I6 264 aa5.58□□□□□ -1.52
NIPBL-206ENST00000509429 GEMIN8Q9NWZ8 242 aaKnown RBP5.58□□□□□ -1.52
NIPBL-206ENST00000509429 ABCF2Q9UG63 623 aa5.58□□□□□ -1.52
NIPBL-206ENST00000509429 ACRP10323 421 aa5.57□□□□□ -1.52
NIPBL-206ENST00000509429 ZNF16P17020 682 aaPredicted RBP5.57□□□□□ -1.52
NIPBL-206ENST00000509429 PEX19P40855 299 aa5.57□□□□□ -1.52
NIPBL-206ENST00000509429 NEXNQ0ZGT2 675 aa5.57□□□□□ -1.52
NIPBL-206ENST00000509429 SMAD4Q13485 552 aaKnown RBP5.57□□□□□ -1.52
NIPBL-206ENST00000509429 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.57□□□□□ -1.52
NIPBL-206ENST00000509429 MCTP2Q6DN12 878 aa5.57□□□□□ -1.52
NIPBL-206ENST00000509429 CSRNP2Q9H175 543 aa5.57□□□□□ -1.52
NIPBL-206ENST00000509429 DBR1Q9UK59 544 aaKnown RBP5.57□□□□□ -1.52
NIPBL-206ENST00000509429 CBFA2T2O43439 604 aa5.56□□□□□ -1.52
NIPBL-206ENST00000509429 ICMTO60725 284 aa5.56□□□□□ -1.52
NIPBL-206ENST00000509429 VDRP11473 427 aa5.56□□□□□ -1.52
NIPBL-206ENST00000509429 PMLP29590 882 aa5.56□□□□□ -1.52
NIPBL-206ENST00000509429 CCAR1Q8IX12 1150 aaKnown RBP5.56□□□□□ -1.52
NIPBL-206ENST00000509429 TXNDC5Q8NBS9 432 aaKnown RBP5.56□□□□□ -1.52
NIPBL-206ENST00000509429 LSM14AQ8ND56 463 aaKnown RBP5.56□□□□□ -1.52
NIPBL-206ENST00000509429 TMC1Q8TDI8 760 aa5.56□□□□□ -1.52
NIPBL-206ENST00000509429 NEU4Q8WWR8 484 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-206ENST00000509429 CPA5Q8WXQ8 436 aa5.56□□□□□ -1.52
NIPBL-206ENST00000509429 ALKBH8Q96BT7 664 aaKnown RBP5.56□□□□□ -1.52
NIPBL-206ENST00000509429 INO80BQ9C086 356 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-206ENST00000509429 TMX4Q9H1E5 349 aaPredicted RBP5.56□□□□□ -1.52
NIPBL-206ENST00000509429 RBM28Q9NW13 759 aaKnown RBP5.56□□□□□ -1.52
NIPBL-206ENST00000509429 FANCIQ9NVI1 1328 aa5.55□□□□□ -1.52
NIPBL-206ENST00000509429 SYNRGQ9UMZ2 1314 aa5.55□□□□□ -1.52
NIPBL-206ENST00000509429 HSP90AA1P07900 732 aaKnown RBP5.55□□□□□ -1.52
NIPBL-206ENST00000509429 XPCQ01831 940 aaPredicted RBP5.55□□□□□ -1.52
NIPBL-206ENST00000509429 SLC20A2Q08357 652 aa5.55□□□□□ -1.52
NIPBL-206ENST00000509429 C9orf131Q5VYM1 1079 aa5.55□□□□□ -1.52
NIPBL-206ENST00000509429 EGFLAMQ63HQ2 1017 aa5.55□□□□□ -1.52
NIPBL-206ENST00000509429 BICRALQ6AI39 1079 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms