RNA–Protein interactions for RNA: ENST00000509330.5

PHF3-209, Transcript of PHD finger protein 3, humanhuman

TSL 1 (best) BASIC

Gene PHF3, Length 2,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-209ENST00000509330 GMPSP49915 693 aaPredicted RBP16.72■□□□□ 0.27
PHF3-209ENST00000509330 STK4Q13043 487 aa16.72■□□□□ 0.27
PHF3-209ENST00000509330 SLC39A2Q9NP94 309 aa16.72■□□□□ 0.27
PHF3-209ENST00000509330 RMND1Q9NWS8 449 aa16.72■□□□□ 0.27
PHF3-209ENST00000509330 PCDHA12Q9UN75 941 aa16.72■□□□□ 0.27
PHF3-209ENST00000509330 SPDYE3A6NKU9 549 aa16.71■□□□□ 0.27
PHF3-209ENST00000509330 TNNT1P13805 278 aa16.71■□□□□ 0.27
PHF3-209ENST00000509330 GRIPAP1Q4V328 841 aa16.71■□□□□ 0.27
PHF3-209ENST00000509330 KRT79Q5XKE5 535 aa16.71■□□□□ 0.27
PHF3-209ENST00000509330 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
PHF3-209ENST00000509330 FAM177A1Q8N128 213 aaPredicted RBP16.71■□□□□ 0.27
PHF3-209ENST00000509330 CCDC150Q8NCX0 1101 aa16.71■□□□□ 0.27
PHF3-209ENST00000509330 BLOC1S4Q9NUP1 217 aa16.71■□□□□ 0.27
PHF3-209ENST00000509330 EXOC1Q9NV70 894 aa16.71■□□□□ 0.27
PHF3-209ENST00000509330 OPLAHO14841 1288 aa16.71■□□□□ 0.26
PHF3-209ENST00000509330 CAP2P40123 477 aa16.71■□□□□ 0.26
PHF3-209ENST00000509330 ARHGAP4P98171 946 aa16.71■□□□□ 0.26
PHF3-209ENST00000509330 CEP135Q66GS9 1140 aa16.71■□□□□ 0.26
PHF3-209ENST00000509330 TMX2Q9Y320 296 aa16.71■□□□□ 0.26
PHF3-209ENST00000509330 MYMKA6NI61 221 aa16.7■□□□□ 0.26
PHF3-209ENST00000509330 TRIM47Q96LD4 638 aa16.7■□□□□ 0.26
PHF3-209ENST00000509330 POLD4Q9HCU8 107 aa16.7■□□□□ 0.26
PHF3-209ENST00000509330 GOPCQ9HD26 462 aa16.7■□□□□ 0.26
PHF3-209ENST00000509330 SPECC1LQ69YQ0 1117 aa16.7■□□□□ 0.26
PHF3-209ENST00000509330 LARP4BQ92615 738 aaKnown RBP16.7■□□□□ 0.26
PHF3-209ENST00000509330 MYH7BA7E2Y1 1941 aa16.7■□□□□ 0.26
PHF3-209ENST00000509330 POTEB3A0JP26 581 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 POTECB2RU33 542 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 E9PMD0 336 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 FAM86B1E9PN63 330 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 FAM86B2P0C5J1 330 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 FXR2P51116 673 aaKnown RBP eCLIP16.69■□□□□ 0.262e-6■■□□□ 11.6
PHF3-209ENST00000509330 KRT31Q15323 416 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 PPP4R3AQ6IN85 833 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 POTEBQ6S5H4 581 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 SV2BQ7L1I2 683 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 APTXQ7Z2E3 356 aaKnown RBP16.69■□□□□ 0.26
PHF3-209ENST00000509330 GLIS3Q8NEA6 775 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 RAB34Q9BZG1 259 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 TBC1D7Q9P0N9 293 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 MEIS1O00470 390 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 N4BP3O15049 544 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 ZNF76P36508 570 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 RBM10P98175 930 aaKnown RBP16.69■□□□□ 0.26
PHF3-209ENST00000509330 LRRC41Q15345 812 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 CDKAL1Q5VV42 579 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 E4F1Q66K89 784 aaPredicted RBP16.69■□□□□ 0.26
PHF3-209ENST00000509330 CPXCR1Q8N123 301 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 ADSSL1Q8N142 457 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 RWDD2AQ9UIY3 292 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 KIAA1024Q9UPX6 916 aa16.69■□□□□ 0.26
PHF3-209ENST00000509330 PRKG1Q13976 671 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 NR1I3Q14994 352 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 NCAPH2Q6IBW4 605 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 SRRTQ9BXP5 876 aaKnown RBP16.68■□□□□ 0.26
PHF3-209ENST00000509330 TMX1Q9H3N1 280 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 HOMER2Q9NSB8 354 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 CNOT7Q9UIV1 285 aaKnown RBP16.68■□□□□ 0.26
PHF3-209ENST00000509330 NPHP3-ACAD11A0A0J9YXS1 232 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 KCNJ18B7U540 433 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 CYP4A11Q02928 519 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 KCNJ12Q14500 433 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 CCAR2Q8N163 923 aaKnown RBP16.68■□□□□ 0.26
PHF3-209ENST00000509330 ZHX3Q9H4I2 956 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 VCPKMTQ9H867 229 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 HACL1Q9UJ83 578 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 A0A1B0GTH6 734 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 NKRFO15226 690 aaKnown RBP eCLIP16.68■□□□□ 0.26
PHF3-209ENST00000509330 TNIP1Q15025 636 aa16.68■□□□□ 0.26
PHF3-209ENST00000509330 CHMP2AO43633 222 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 RHOBTB3O94955 611 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 INPP5BP32019 993 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 NBPF12Q5TAG4 269 aaPredicted RBP16.67■□□□□ 0.26
PHF3-209ENST00000509330 ADD3Q9UEY8 706 aaKnown RBP16.67■□□□□ 0.26
PHF3-209ENST00000509330 ZNF541Q9H0D2 1346 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 POTEFA5A3E0 1075 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 POTEIP0CG38 1075 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 POTEGQ6S5H5 508 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 POTEEQ6S8J3 1075 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 DLK2Q6UY11 383 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 KIAA0895Q8NCT3 520 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 GIMAP8Q8ND71 665 aaPredicted RBP16.67■□□□□ 0.26
PHF3-209ENST00000509330 DDX12PQ92771 950 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 AGBL1Q96MI9 1066 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 PKD2L1Q9P0L9 805 aa16.67■□□□□ 0.26
PHF3-209ENST00000509330 PSMA7O14818 248 aa16.66■□□□□ 0.26
PHF3-209ENST00000509330 RBL2Q08999 1139 aa16.66■□□□□ 0.26
PHF3-209ENST00000509330 FAM83AQ86UY5 434 aa16.66■□□□□ 0.26
PHF3-209ENST00000509330 RAD54LQ92698 747 aa16.66■□□□□ 0.26
PHF3-209ENST00000509330 DESI2Q9BSY9 194 aa16.66■□□□□ 0.26
PHF3-209ENST00000509330 RIOK3O14730 519 aaKnown RBP16.66■□□□□ 0.26
PHF3-209ENST00000509330 STIM1Q13586 685 aa16.66■□□□□ 0.26
PHF3-209ENST00000509330 PTPN14Q15678 1187 aa16.66■□□□□ 0.26
PHF3-209ENST00000509330 TC2NQ8N9U0 490 aa16.66■□□□□ 0.26
PHF3-209ENST00000509330 ZBED3Q96IU2 234 aaPredicted RBP16.66■□□□□ 0.26
PHF3-209ENST00000509330 DEFB129Q9H1M3 183 aa16.66■□□□□ 0.26
PHF3-209ENST00000509330 NRDCO43847 1150 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 AMPD3Q01432 767 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 MTF1Q14872 753 aa16.65■□□□□ 0.26
PHF3-209ENST00000509330 FILIP1LQ4L180 1135 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms