RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 ANTXR2P58335 489 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 RPS6P62753 249 aaKnown RBP12.76□□□□□ -0.37
RNF4-212ENST00000509258 PWP2Q15269 919 aaKnown RBP12.76□□□□□ -0.37
RNF4-212ENST00000509258 CDC37Q16543 378 aaPredicted RBP12.76□□□□□ -0.37
RNF4-212ENST00000509258 QRICH1Q2TAL8 776 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 TJAP1Q5JTD0 557 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 CHST3Q7LGC8 479 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 PPP1R13LQ8WUF5 828 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 NOC4LQ9BVI4 516 aaKnown RBP12.76□□□□□ -0.37
RNF4-212ENST00000509258 JMJD4Q9H9V9 463 aa12.76□□□□□ -0.37
RNF4-212ENST00000509258 GPHNQ9NQX3 736 aaPredicted RBP12.76□□□□□ -0.37
RNF4-212ENST00000509258 B4DLN1 442 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 B4GALT4O60513 344 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 FGBP02675 491 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 MRPL12P52815 198 aaKnown RBP12.75□□□□□ -0.37
RNF4-212ENST00000509258 UMODL1Q5DID0 1318 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 RNF207Q6ZRF8 634 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 IQCA1Q86XH1 822 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 COPS5Q92905 334 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 KRT23Q9C075 422 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 KAT14Q9H8E8 782 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 VAT1LQ9HCJ6 419 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 CTNNA3Q9UI47 895 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 CHD9Q3L8U1 2897 aa12.75□□□□□ -0.37
RNF4-212ENST00000509258 PTPRSQ13332 1948 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 E7EWF7 191 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 ARIH2O95376 493 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 EDNRBP24530 442 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 CPT1AP50416 773 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 CCL23P55773 120 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 PSMC6P62333 389 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 DUSP28Q4G0W2 176 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 BRDTQ58F21 947 aaPredicted RBP12.74□□□□□ -0.37
RNF4-212ENST00000509258 GPATCH4Q5T3I0 446 aaKnown RBP12.74□□□□□ -0.37
RNF4-212ENST00000509258 KIAA1211Q6ZU35 1233 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 OTOP2Q7RTS6 562 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 TRPV6Q9H1D0 765 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 WNT8AQ9H1J5 351 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 ALDH8A1Q9H2A2 487 aaPredicted RBP12.74□□□□□ -0.37
RNF4-212ENST00000509258 PRDM12Q9H4Q4 367 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 SLC28A3Q9HAS3 691 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 PRDM6Q9NQX0 595 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 POLR3EQ9NVU0 708 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 CXXC1Q9P0U4 656 aaPredicted RBP12.74□□□□□ -0.37
RNF4-212ENST00000509258 MAD2L2Q9UI95 211 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 TANC1Q9C0D5 1861 aa12.74□□□□□ -0.37
RNF4-212ENST00000509258 RBM47A0AV96 593 aaKnown RBP12.73□□□□□ -0.37
RNF4-212ENST00000509258 PFKMP08237 780 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 PARP1P09874 1014 aaKnown RBP12.73□□□□□ -0.37
RNF4-212ENST00000509258 SUPT20HL2P0C7V6 817 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 ASPRV1Q53RT3 343 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 CCDC178Q5BJE1 867 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 IFIT1BQ5T764 474 aaKnown RBP12.73□□□□□ -0.37
RNF4-212ENST00000509258 MB21D2Q8IYB1 491 aaPredicted RBP12.73□□□□□ -0.37
RNF4-212ENST00000509258 RPUSD2Q8IZ73 545 aaKnown RBP12.73□□□□□ -0.37
RNF4-212ENST00000509258 SYTL5Q8TDW5 730 aaPredicted RBP12.73□□□□□ -0.37
RNF4-212ENST00000509258 ATXN2LQ8WWM7 1075 aaKnown RBP12.73□□□□□ -0.37
RNF4-212ENST00000509258 MTMR8Q96EF0 704 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 TAAR1Q96RJ0 339 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 UBAC1Q9BSL1 405 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 WDR11Q9BZH6 1224 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 LSG1Q9H089 658 aaKnown RBP12.73□□□□□ -0.37
RNF4-212ENST00000509258 CNNM2Q9H8M5 875 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 THEGQ9P2T0 379 aa12.73□□□□□ -0.37
RNF4-212ENST00000509258 RBM8AQ9Y5S9 174 aaKnown RBP12.73□□□□□ -0.37
RNF4-212ENST00000509258 PALM3A6NDB9 673 aaPredicted RBP12.72□□□□□ -0.37
RNF4-212ENST00000509258 CYTH3O43739 400 aa12.72□□□□□ -0.37
RNF4-212ENST00000509258 PURAQ00577 322 aaKnown RBP12.72□□□□□ -0.37
RNF4-212ENST00000509258 PPP2R5BQ15173 497 aa12.72□□□□□ -0.37
RNF4-212ENST00000509258 PPM1EQ8WY54 764 aa12.72□□□□□ -0.37
RNF4-212ENST00000509258 MAP4K1Q92918 833 aa12.72□□□□□ -0.37
RNF4-212ENST00000509258 VWCEQ96DN2 955 aa12.72□□□□□ -0.37
RNF4-212ENST00000509258 NKX2-4Q9H2Z4 354 aa12.72□□□□□ -0.37
RNF4-212ENST00000509258 SLC4A7Q9Y6M7 1214 aa12.72□□□□□ -0.37
RNF4-212ENST00000509258 CHD7Q9P2D1 2997 aa12.71□□□□□ -0.37
RNF4-212ENST00000509258 ZBBXA8MT70 800 aa12.71□□□□□ -0.37
RNF4-212ENST00000509258 KLRF2D3W0D1 207 aa12.71□□□□□ -0.37
RNF4-212ENST00000509258 NKRFO15226 690 aaKnown RBP eCLIP12.71□□□□□ -0.37
RNF4-212ENST00000509258 ADGRE1Q14246 886 aa12.71□□□□□ -0.37
RNF4-212ENST00000509258 GRM4Q14833 912 aa12.71□□□□□ -0.37
RNF4-212ENST00000509258 PPP2R2DQ66LE6 453 aa12.71□□□□□ -0.37
RNF4-212ENST00000509258 OR6J1Q8NGC5 347 aa12.71□□□□□ -0.37
RNF4-212ENST00000509258 IGDCC4Q8TDY8 1250 aa12.71□□□□□ -0.37
RNF4-212ENST00000509258 MTG1Q9BT17 334 aaPredicted RBP12.71□□□□□ -0.37
RNF4-212ENST00000509258 MAF1Q9H063 256 aa12.71□□□□□ -0.37
RNF4-212ENST00000509258 TRMT13Q9NUP7 481 aaKnown RBP12.71□□□□□ -0.37
RNF4-212ENST00000509258 YBX2Q9Y2T7 364 aaKnown RBP12.71□□□□□ -0.37
RNF4-212ENST00000509258 U3KPZ7 1027 aaPredicted RBP12.71□□□□□ -0.37
RNF4-212ENST00000509258 ABCB11O95342 1321 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 TNFRSF10AO00220 468 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 IFIT3O14879 490 aaKnown RBP12.7□□□□□ -0.38
RNF4-212ENST00000509258 DHX16O60231 1041 aaKnown RBP12.7□□□□□ -0.38
RNF4-212ENST00000509258 MYL3P08590 195 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 ATP2A2P16615 1042 aaKnown RBP12.7□□□□□ -0.38
RNF4-212ENST00000509258 IGFBP4P22692 258 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 PDE4DQ08499 809 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 TROAPQ12815 778 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 CCDC62Q6P9F0 684 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 FBXO11Q86XK2 927 aa12.7□□□□□ -0.38
RNF4-212ENST00000509258 RGS22Q8NE09 1264 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms