RNA–Protein interactions for RNA: ENST00000509206.1

RNF4-211, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 490 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-211ENST00000509206 SPRED2Q7Z698 418 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 TMCO2Q7Z6W1 182 aaPredicted RBP4.69□□□□□ -1.66
RNF4-211ENST00000509206 RPAINQ86UA6 219 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 KIAA2013Q8IYS2 634 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 SPICE1Q8N0Z3 855 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 ANKRD35Q8N283 1001 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 CCDC155Q8N6L0 562 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 SLC43A3Q8NBI5 491 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 KAZALD1Q96I82 304 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 UPF3AQ9H1J1 476 aaKnown RBP4.69□□□□□ -1.66
RNF4-211ENST00000509206 ALDH8A1Q9H2A2 487 aaPredicted RBP4.69□□□□□ -1.66
RNF4-211ENST00000509206 DNAJC18Q9H819 358 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 ARHGEF10LQ9HCE6 1279 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 TRMT13Q9NUP7 481 aaKnown RBP4.69□□□□□ -1.66
RNF4-211ENST00000509206 CD207Q9UJ71 328 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 AKAP2Q9Y2D5 859 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 INSL6Q9Y581 213 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 BAHCC1Q9P281 2608 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 FLT1P17948 1338 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 GBF1Q92538 1859 aa4.69□□□□□ -1.66
RNF4-211ENST00000509206 EPG5Q9HCE0 2579 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 MYH2Q9UKX2 1941 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 C5orf42Q9H799 3197 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 CACNA1HO95180 2353 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 EFCAB14O75071 495 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 GJB5O95377 273 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 POLR3DP05423 398 aaPredicted RBP4.68□□□□□ -1.66
RNF4-211ENST00000509206 MYL3P08590 195 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 ADORA1P30542 326 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 NDUFV1P49821 464 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 WDR5P61964 334 aaKnown RBP4.68□□□□□ -1.66
RNF4-211ENST00000509206 CTDSPL2Q05D32 466 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 IKBKEQ14164 716 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 SEPT2Q15019 361 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 TATDN1Q6P1N9 297 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 MAMDC4Q6UXC1 1216 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 ARMCX2Q7L311 632 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 TLK2Q86UE8 772 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 METTL16Q86W50 562 aaKnown RBP4.68□□□□□ -1.66
RNF4-211ENST00000509206 ANKRD44Q8N8A2 993 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 SPATA5Q8NB90 893 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 TSC1Q92574 1164 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 PPP2R3CQ969Q6 453 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 XAGE2Q96GT9 111 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 RPGRIP1Q96KN7 1286 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 SAMD11Q96NU1 681 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 C17orf80Q9BSJ5 609 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 MFSD1Q9H3U5 465 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 PLA2G2EQ9NZK7 142 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 REV3LO60673 3130 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 ATRXP46100 2492 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 PDS5AQ29RF7 1337 aaKnown RBP4.68□□□□□ -1.66
RNF4-211ENST00000509206 A0A1B0GUL6 1792 aa4.68□□□□□ -1.66
RNF4-211ENST00000509206 TECTAO75443 2155 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 ABHD14A-ACY1A0A1B0GW23 586 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 ASB14A6NK59 587 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 E9PSI1 815 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 WDR46O15213 610 aaKnown RBP4.67□□□□□ -1.66
RNF4-211ENST00000509206 ZBED4O75132 1171 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 VAMP4O75379 141 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 CIAO1O76071 339 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 LMNAP02545 664 aaKnown RBP4.67□□□□□ -1.66
RNF4-211ENST00000509206 AMHP03971 560 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 SDHBP21912 280 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 LRRFIP1Q32MZ4 808 aaKnown RBP4.67□□□□□ -1.66
RNF4-211ENST00000509206 KMT5BQ4FZB7 885 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 EPC2Q52LR7 807 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 KIAA0319Q5VV43 1072 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 SNRNP48Q6IEG0 339 aaKnown RBP4.67□□□□□ -1.66
RNF4-211ENST00000509206 ATG9AQ7Z3C6 839 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 CPXCR1Q8N123 301 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.67□□□□□ -1.66
RNF4-211ENST00000509206 RIPOR3Q96MK2 946 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 SH2B1Q9NRF2 756 aaPredicted RBP4.67□□□□□ -1.66
RNF4-211ENST00000509206 HMG20BQ9P0W2 317 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 HDAC5Q9UQL6 1122 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 GRIN2DO15399 1336 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 ATAD5Q96QE3 1844 aa4.67□□□□□ -1.66
RNF4-211ENST00000509206 A0A1W2PRG0 241 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 CFAP99D6REC4 459 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 H3BNC9 293 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 VWA5AO00534 786 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 CSPG5O95196 566 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 PARNO95453 639 aaKnown RBP4.66□□□□□ -1.66
RNF4-211ENST00000509206 UQCRFS1P1P0C7P4 283 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 CPT1AP50416 773 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 DEFB103AP81534 67 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 EXOSC9Q06265 439 aaKnown RBP4.66□□□□□ -1.66
RNF4-211ENST00000509206 DMWDQ09019 674 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 RSPO4Q2I0M5 234 aaPredicted RBP4.66□□□□□ -1.66
RNF4-211ENST00000509206 IQSEC1Q6DN90 963 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 CNKSR3Q6P9H4 555 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 KIAA1211Q6ZU35 1233 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 CERS3Q8IU89 383 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 TMEM192Q8IY95 271 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 CCDC144CPQ8IYA2 1237 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 MYOCDQ8IZQ8 938 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 MAGEB6Q8N7X4 407 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 VWCEQ96DN2 955 aa4.66□□□□□ -1.66
RNF4-211ENST00000509206 CALR3Q96L12 384 aaKnown RBP4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms