RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 C9orf50Q5SZB4 431 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 ZNF654Q8IZM8 581 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 RGS22Q8NE09 1264 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 RMDN3Q96TC7 470 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 PCDHA1Q9Y5I3 950 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 MROH7Q68CQ1 1323 aa17.2■□□□□ 0.34
UBE2D3-228ENST00000508974 LAMA2P24043 3122 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 RBM47A0AV96 593 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 B4DLN1 442 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 KIAA0355O15063 1070 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 CYTH3O43739 400 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 ZEB2O60315 1214 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 CDC45O75419 566 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 ARIH2O95376 493 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 MYL3P08590 195 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 TXNP10599 105 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 RXRAP19793 462 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 HOXA13P31271 388 aaPredicted RBP17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 CDK7P50613 346 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 MRPL12P52815 198 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 NKX3-2P78367 333 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 NECTIN1Q15223 517 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 SHHQ15465 462 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 LRIT3Q3SXY7 679 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 ARHGEF16Q5VV41 709 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 SEPT14Q6ZU15 432 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 NSUN6Q8TEA1 469 aaKnown RBP17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 SCFD2Q8WU76 684 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 PPP1R13LQ8WUF5 828 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 MTMR8Q96EF0 704 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 TOX2Q96NM4 488 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 PPP1R12CQ9BZL4 782 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 Q9Y3F1 56 aa17.19■□□□□ 0.34
UBE2D3-228ENST00000508974 MYH7BA7E2Y1 1941 aa17.18■□□□□ 0.34
UBE2D3-228ENST00000508974 CCDC69A6NI79 296 aa17.18■□□□□ 0.34
UBE2D3-228ENST00000508974 SH2B2O14492 632 aaPredicted RBP17.18■□□□□ 0.34
UBE2D3-228ENST00000508974 TLR3O15455 904 aaKnown RBP17.18■□□□□ 0.34
UBE2D3-228ENST00000508974 ITGA7Q13683 1181 aa17.18■□□□□ 0.34
UBE2D3-228ENST00000508974 Q7L0L9 218 aa17.18■□□□□ 0.34
UBE2D3-228ENST00000508974 FAM126BQ8IXS8 530 aa17.18■□□□□ 0.34
UBE2D3-228ENST00000508974 CTCFLQ8NI51 663 aaPredicted RBP17.18■□□□□ 0.34
UBE2D3-228ENST00000508974 RIOX1Q9H6W3 641 aa17.18■□□□□ 0.34
UBE2D3-228ENST00000508974 MYCLP12524 364 aaPredicted RBP17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 CPT1AP50416 773 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 HSD17B4P51659 736 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 EPHB4P54760 987 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 CHMP4BP1P59074 171 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 FPGSQ05932 587 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 STXBP2Q15833 593 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 LY6KQ17RY6 165 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 CMTR1Q8N1G2 835 aaKnown RBP17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 PXMP2Q9NR77 195 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 TBX21Q9UL17 535 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 GRIN2DO15399 1336 aa17.17■□□□□ 0.34
UBE2D3-228ENST00000508974 PNMA6FA0A0J9YX94 578 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 CABYRO75952 493 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 DDAH1O94760 285 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 PLEKHA8P1O95397 391 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 TTLL4Q14679 1199 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 FCHSD1Q86WN1 690 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 ZFP91Q96JP5 570 aaPredicted RBP17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 TMEM87BQ96K49 555 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 TCEANC2Q96MN5 208 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 TRPV6Q9H1D0 765 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 POLR3EQ9NVU0 708 aa17.16■□□□□ 0.34
UBE2D3-228ENST00000508974 SORBS3O60504 671 aa17.15■□□□□ 0.34
UBE2D3-228ENST00000508974 TIMP1P01033 207 aa17.15■□□□□ 0.34
UBE2D3-228ENST00000508974 NEFLP07196 543 aa17.15■□□□□ 0.34
UBE2D3-228ENST00000508974 KIF5BP33176 963 aa17.15■□□□□ 0.34
UBE2D3-228ENST00000508974 PURAQ00577 322 aaKnown RBP17.15■□□□□ 0.34
UBE2D3-228ENST00000508974 RNF20Q5VTR2 975 aa17.15■□□□□ 0.34
UBE2D3-228ENST00000508974 DEFB123Q8N688 67 aa17.15■□□□□ 0.34
UBE2D3-228ENST00000508974 IWS1Q96ST2 819 aa17.15■□□□□ 0.34
UBE2D3-228ENST00000508974 hCG_1642624A0A1W2PR95 340 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 NKRFO15226 690 aaKnown RBP eCLIP17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 B4GALT4O60513 344 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 CD4P01730 458 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 NR3C2P08235 984 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 CYP2C18P33260 490 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 BRDTQ58F21 947 aaPredicted RBP17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 FAM47CQ5HY64 1035 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 CCDC82Q8N4S0 544 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 SLC43A3Q8NBI5 491 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 IL31RAQ8NI17 732 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 RRP36Q96EU6 259 aaKnown RBP17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 RNPC3Q96LT9 517 aaKnown RBP17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 MAF1Q9H063 256 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 SLC12A7Q9Y666 1083 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 UMODL1Q5DID0 1318 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 DOCK5Q9H7D0 1870 aa17.14■□□□□ 0.33
UBE2D3-228ENST00000508974 GCOM1H8Y6P7 765 aaPredicted RBP17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 POLR2MP0CAP2 368 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 CSF2RAP15509 400 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 TRAF1Q13077 416 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 ADCK5Q3MIX3 580 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 CCDC62Q6P9F0 684 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 MICU3Q86XE3 530 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 RASEFQ8IZ41 740 aa17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 SRBD1Q8N5C6 995 aaKnown RBP17.13■□□□□ 0.33
UBE2D3-228ENST00000508974 AFG1LQ8WV93 481 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms