RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 ZBTB5O15062 677 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 DYNC1LI2O43237 492 aaPredicted RBP10.06□□□□□ -0.8
SNCA-211ENST00000508895 DHX16O60231 1041 aaKnown RBP10.06□□□□□ -0.8
SNCA-211ENST00000508895 RPS6KB1P23443 525 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 CDK7P50613 346 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 HSD17B4P51659 736 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 ANAPC15P60006 121 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 PSMC6P62333 389 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 CXCL17Q6UXB2 119 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 DHX32Q7L7V1 743 aaKnown RBP10.06□□□□□ -0.8
SNCA-211ENST00000508895 TLK2Q86UE8 772 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 UPF3BQ9BZI7 483 aaKnown RBP10.06□□□□□ -0.8
SNCA-211ENST00000508895 SPTBN5Q9NRC6 3674 aaKnown RBP10.06□□□□□ -0.8
SNCA-211ENST00000508895 TET1Q8NFU7 2136 aa10.06□□□□□ -0.8
SNCA-211ENST00000508895 NID2Q14112 1375 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 ERICH2A1L162 156 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 EIF5BO60841 1220 aaKnown RBP10.05□□□□□ -0.8
SNCA-211ENST00000508895 DTNBO60941 627 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 CFBP00751 764 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 HMGB1P09429 215 aaKnown RBP10.05□□□□□ -0.8
SNCA-211ENST00000508895 EIF2AK2P19525 551 aaKnown RBP10.05□□□□□ -0.8
SNCA-211ENST00000508895 LIFRP42702 1097 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 GHRHRQ02643 423 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 FAAP100Q0VG06 881 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 FUT2Q10981 343 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 GNASQ5JWF2 1037 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 C9orf50Q5SZB4 431 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 CCDC62Q6P9F0 684 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 BLOC1S2Q6QNY1 142 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 RNF180Q86T96 592 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 SGMS1Q86VZ5 419 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 RGS22Q8NE09 1264 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 TSEN34Q9BSV6 310 aaKnown RBP10.05□□□□□ -0.8
SNCA-211ENST00000508895 AGXT2Q9BYV1 514 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 WDR11Q9BZH6 1224 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 TM6SF1Q9BZW5 370 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 ZSWIM6Q9HCJ5 1215 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 VTA1Q9NP79 307 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 PCDHA1Q9Y5I3 950 aa10.05□□□□□ -0.8
SNCA-211ENST00000508895 EYSQ5T1H1 3165 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 PRUNE2Q8WUY3 3088 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 PNMA6FA0A0J9YX94 578 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 SORBS3O60504 671 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 PQBP1O60828 265 aaKnown RBP10.04□□□□□ -0.8
SNCA-211ENST00000508895 DDAH1O94760 285 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 CDC27P30260 824 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 BMP8BP34820 402 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 TOB2Q14106 344 aaPredicted RBP10.04□□□□□ -0.8
SNCA-211ENST00000508895 LY6KQ17RY6 165 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 DUSP28Q4G0W2 176 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 C1orf53Q5VUE5 145 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 IQSEC1Q6DN90 963 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 TYW1BQ6NUM6 668 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 APOA5Q6Q788 366 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 NOL8Q76FK4 1167 aaKnown RBP10.04□□□□□ -0.8
SNCA-211ENST00000508895 RUFY3Q7L099 469 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 CATIPQ7Z7H3 387 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 CCDC82Q8N4S0 544 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 BADQ92934 168 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 VWCEQ96DN2 955 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 KIF2CQ99661 725 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 AMNQ9BXJ7 453 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 COL25A1Q9BXS0 654 aaPredicted RBP10.04□□□□□ -0.8
SNCA-211ENST00000508895 BACH2Q9BYV9 841 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 PRDM5Q9NQX1 630 aaPredicted RBP10.04□□□□□ -0.8
SNCA-211ENST00000508895 STARD7Q9NQZ5 370 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 PXMP2Q9NR77 195 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 MRPL11Q9Y3B7 192 aaKnown RBP10.04□□□□□ -0.8
SNCA-211ENST00000508895 UMODL1Q5DID0 1318 aa10.04□□□□□ -0.8
SNCA-211ENST00000508895 PPFIA3O75145 1194 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 NR3C2P08235 984 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 PSMA5P28066 241 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 RBM25P49756 843 aaKnown RBP10.03□□□□□ -0.8
SNCA-211ENST00000508895 SP2Q02086 613 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 ARHGAP1Q07960 439 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 PDE4DQ08499 809 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 APOBRQ0VD83 1088 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 SEMA3FQ13275 785 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 FSCN1Q16658 493 aaKnown RBP10.03□□□□□ -0.8
SNCA-211ENST00000508895 USP17L6PQ6QN14 398 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 SEPT14Q6ZU15 432 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 Q6ZUG5 572 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 TMTC3Q6ZXV5 915 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 FCHSD1Q86WN1 690 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 MICU3Q86XE3 530 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 FBXL16Q8N461 479 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 SLC43A3Q8NBI5 491 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 DNERQ8NFT8 737 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 BRF1Q92994 677 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 RMDN3Q96TC7 470 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 PDCD2LQ9BRP1 358 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 LARP6Q9BRS8 491 aaKnown RBP10.03□□□□□ -0.8
SNCA-211ENST00000508895 SPZ1Q9BXG8 430 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 ADD3Q9UEY8 706 aaKnown RBP10.03□□□□□ -0.8
SNCA-211ENST00000508895 MUC3AQ02505 3323 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 CNTNAP5Q8WYK1 1306 aa10.03□□□□□ -0.8
SNCA-211ENST00000508895 LAMA2P24043 3122 aaKnown RBP10.02□□□□□ -0.8
SNCA-211ENST00000508895 KLF18A0A0U1RQI7 1052 aa10.02□□□□□ -0.81
SNCA-211ENST00000508895 MOXD2PA6NHM9 499 aa10.02□□□□□ -0.81
SNCA-211ENST00000508895 CCDC69A6NI79 296 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms