RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 ELF2Q15723 593 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 SHROOM1Q2M3G4 852 aaPredicted RBP12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 QRICH1Q2TAL8 776 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 JAKMIP3Q5VZ66 844 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 DPY19L2Q6NUT2 758 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 MNS1Q8NEH6 495 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 NELFBQ8WX92 580 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 STAMQ92783 540 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 ARHGEF10LQ9HCE6 1279 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 PGAP2Q9UHJ9 254 aa12.97□□□□□ -0.33
PRPF40B-203ENST00000508736 CLRN2A0PK11 232 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 MFAP3LO75121 409 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 NDUFB10O96000 172 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 GCFC2P16383 781 aaKnown RBP12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 CASQ1P31415 396 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 GMPSP49915 693 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 RRP1BQ14684 758 aaKnown RBP12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 NAA30Q147X3 362 aaPredicted RBP12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 KARSQ15046 597 aaKnown RBP12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 GPC2Q8N158 579 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 MTMR9Q96QG7 549 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 PSTPIP2Q9H939 334 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 TMEM260Q9NX78 707 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 OGFRQ9NZT2 677 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 TMX2Q9Y320 296 aa12.96□□□□□ -0.33
PRPF40B-203ENST00000508736 DICER1Q9UPY3 1922 aaKnown RBP12.96□□□□□ -0.34
PRPF40B-203ENST00000508736 H7C1D1 291 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 N4BP3O15049 544 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 TEX33O43247 280 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 BMP3P12645 472 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 FXR2P51116 673 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 ZNF280AP59817 542 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 JAG1P78504 1218 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 TRAF1Q13077 416 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 KRT31Q15323 416 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 CDC37Q16543 378 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 TOGARAM2Q6ZUX3 1019 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 AMNQ9BXJ7 453 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 MYOZ2Q9NPC6 264 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 LRRC10BA6NIK2 292 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 KCNJ18B7U540 433 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 WNT10BO00744 389 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 EDIL3O43854 480 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 URI1O94763 535 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 PPP1R2P41236 205 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 TNNI2P48788 182 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 GNG11P61952 73 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 RBL2Q08999 1139 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 AP3B2Q13367 1082 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 KCNJ12Q14500 433 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 PDIA5Q14554 519 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 NAALADL2Q58DX5 795 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 TCP11X2Q5H9J9 407 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 NOC3LQ8WTT2 800 aaKnown RBP12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 MTRQ99707 1265 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 KBTBD4Q9NVX7 518 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 ZBTB21Q9ULJ3 1066 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 PCDHA1Q9Y5I3 950 aa12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 V9GYY5 206 aaPredicted RBP12.95□□□□□ -0.34
PRPF40B-203ENST00000508736 A0A1W2PRG0 241 aa12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 PSMA7O14818 248 aa12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 PLA2G6O60733 806 aa12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 COPB1P53618 953 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 SYDE2Q5VT97 1194 aa12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 MOXD1Q6UVY6 613 aa12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 RAB34Q9BZG1 259 aa12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 SH2D4AQ9H788 454 aa12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 VEZTQ9HBM0 779 aa12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 GOPCQ9HD26 462 aa12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 ARGLU1Q9NWB6 273 aaPredicted RBP12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 CNOT7Q9UIV1 285 aaKnown RBP12.94□□□□□ -0.34
PRPF40B-203ENST00000508736 SHTN1A0MZ66 631 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 EEF1GP26641 437 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 CCT6AP40227 531 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 USP11P51784 963 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 CBX1P83916 185 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 TNFAIP1Q13829 316 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 CALCRLQ16602 461 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 TMEM266Q2M3C6 531 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 CABP7Q86V35 215 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 POTEDQ86YR6 584 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 ADSSL1Q8N142 457 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 UBXN4Q92575 508 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 GINM1Q9NU53 330 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 DDX41Q9UJV9 622 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 ZC3H4Q9UPT8 1303 aaKnown RBP12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 GLTPD2A6NH11 291 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 EFCAB8A8MWE9 144 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 RAD21O60216 631 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 RHOBTB3O94955 611 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 FECHP22830 423 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 CASP14P31944 242 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 CAP2P40123 477 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 PRCPP42785 496 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 AMPD3Q01432 767 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 KMT5BQ4FZB7 885 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 FBXO11Q86XK2 927 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 TMTC1Q8IUR5 882 aa12.93□□□□□ -0.34
PRPF40B-203ENST00000508736 MICALL2Q8IY33 904 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms