RNA–Protein interactions for RNA: ENST00000508465.5

NUP54-206, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 744 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-206ENST00000508465 ANKRD36BQ8N2N9 1353 aa6.21□□□□□ -1.41
NUP54-206ENST00000508465 PSPNO60542 156 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 PLCG1P19174 1290 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 GNA15P30679 374 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 HOXC9P31274 260 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 TNNI2P48788 182 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 DDB1Q16531 1140 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 MAP3K11Q16584 847 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 HSP90AB2PQ58FF8 381 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 FAM196AQ6ZSG2 479 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 USHBP1Q8N6Y0 703 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 CXorf38Q8TB03 319 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 JARID2Q92833 1246 aaPredicted RBP6.21□□□□□ -1.42
NUP54-206ENST00000508465 SIGLEC10Q96LC7 697 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 ASCC2Q9H1I8 757 aaPredicted RBP6.21□□□□□ -1.42
NUP54-206ENST00000508465 RTEL1Q9NZ71 1219 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 THRAP3Q9Y2W1 955 aaKnown RBP6.21□□□□□ -1.42
NUP54-206ENST00000508465 NRAPQ86VF7 1730 aa6.21□□□□□ -1.42
NUP54-206ENST00000508465 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.21□□□□□ -1.42
NUP54-206ENST00000508465 SLIT3O75094 1523 aa6.2□□□□□ -1.42
NUP54-206ENST00000508465 NFAT5O94916 1531 aa6.2□□□□□ -1.42
NUP54-206ENST00000508465 NINLQ9Y2I6 1382 aa6.2□□□□□ -1.42
NUP54-206ENST00000508465 CRB1P82279 1406 aa6.2□□□□□ -1.42
NUP54-206ENST00000508465 EXOC5O00471 708 aa6.2□□□□□ -1.42
NUP54-206ENST00000508465 TRIM13O60858 407 aa6.2□□□□□ -1.42
NUP54-206ENST00000508465 SRSF3P84103 164 aaKnown RBP6.2□□□□□ -1.42
NUP54-206ENST00000508465 EZH2Q15910 746 aaKnown RBP6.2□□□□□ -1.42
NUP54-206ENST00000508465 ARID3AQ99856 593 aa6.2□□□□□ -1.42
NUP54-206ENST00000508465 COL18A1P39060 1754 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 RGPD5Q99666 1765 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 BLMP54132 1417 aaPredicted RBP6.19□□□□□ -1.42
NUP54-206ENST00000508465 NSD3Q9BZ95 1437 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 RBM47A0AV96 593 aaKnown RBP6.19□□□□□ -1.42
NUP54-206ENST00000508465 UPK3BL1B0FP48 263 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 UPK3BL2E5RIL1 263 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 HRKO00198 91 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 KCNQ2O43526 872 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 LRRN2O75325 713 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 CHMP4BP1P59074 171 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 TEKQ02763 1124 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 SSPNQ14714 243 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 SLC14A2Q15849 920 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 ADGRF1Q5T601 910 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 NBPF6Q5VWK0 638 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 SIRT2Q8IXJ6 389 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 LINC01599Q8WXQ3 324 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 SHISA4Q96DD7 197 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 NBPF4Q96M43 638 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 ASPNQ9BXN1 380 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 LMO7Q8WWI1 1683 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 MON2Q7Z3U7 1717 aa6.19□□□□□ -1.42
NUP54-206ENST00000508465 OVOS2A0A0J9YW53 1432 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 OVOS2Q6IE36 1432 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 BPNT1O95861 308 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 IL2RBP14784 551 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 PI3P19957 117 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 AFF3P51826 1226 aaKnown RBP6.18□□□□□ -1.42
NUP54-206ENST00000508465 TMEM201Q5SNT2 666 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 OLFML2BQ68BL8 750 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 ENOX1Q8TC92 643 aaKnown RBP6.18□□□□□ -1.42
NUP54-206ENST00000508465 BORCS6Q96GS4 357 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 POLKQ9UBT6 870 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 ZMYM5Q9UJ78 669 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 AK5Q9Y6K8 562 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 CGNL1Q0VF96 1302 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 KIF7Q2M1P5 1343 aa6.18□□□□□ -1.42
NUP54-206ENST00000508465 P4HBP07237 508 aaKnown RBP6.17□□□□□ -1.42
NUP54-206ENST00000508465 CELA3BP08861 270 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 TFE3P19532 575 aaPredicted RBP6.17□□□□□ -1.42
NUP54-206ENST00000508465 RPL10P27635 214 aaKnown RBP6.17□□□□□ -1.42
NUP54-206ENST00000508465 R3HDM1Q15032 1099 aaKnown RBP6.17□□□□□ -1.42
NUP54-206ENST00000508465 PRRT2Q7Z6L0 340 aaPredicted RBP6.17□□□□□ -1.42
NUP54-206ENST00000508465 NLRX1Q86UT6 975 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 MORC1Q86VD1 984 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 SLFN12Q8IYM2 578 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 CCDC74BQ96LY2 380 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 KREMEN1Q96MU8 473 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 CAMKK2Q96RR4 588 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 XYLT2Q9H1B5 865 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 CRTAC1Q9NQ79 661 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 EBF1Q9UH73 591 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 MBD1Q9UIS9 605 aaPredicted RBP6.17□□□□□ -1.42
NUP54-206ENST00000508465 KNSTRNQ9Y448 316 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 CORINQ9Y5Q5 1042 aa6.17□□□□□ -1.42
NUP54-206ENST00000508465 SSU72P8A0A1W2PR75 194 aa6.16□□□□□ -1.42
NUP54-206ENST00000508465 N4BP3O15049 544 aa6.16□□□□□ -1.42
NUP54-206ENST00000508465 GALK1P51570 392 aa6.16□□□□□ -1.42
NUP54-206ENST00000508465 CC2D1BQ5T0F9 858 aaKnown RBP6.16□□□□□ -1.42
NUP54-206ENST00000508465 RNF111Q6ZNA4 994 aa6.16□□□□□ -1.42
NUP54-206ENST00000508465 CCDC84Q86UT8 332 aaPredicted RBP6.16□□□□□ -1.42
NUP54-206ENST00000508465 ZCRB1Q8TBF4 217 aaKnown RBP6.16□□□□□ -1.42
NUP54-206ENST00000508465 PANK1Q8TE04 598 aa6.16□□□□□ -1.42
NUP54-206ENST00000508465 DACT3Q96B18 629 aaPredicted RBP6.16□□□□□ -1.42
NUP54-206ENST00000508465 THSD7AQ9UPZ6 1657 aa6.16□□□□□ -1.42
NUP54-206ENST00000508465 CCDC7Q96M83 1385 aa6.16□□□□□ -1.42
NUP54-206ENST00000508465 OTOL1A6NHN0 477 aaPredicted RBP6.15□□□□□ -1.42
NUP54-206ENST00000508465 ABLIM1O14639 778 aa6.15□□□□□ -1.42
NUP54-206ENST00000508465 PRPF40AO75400 957 aaKnown RBP6.15□□□□□ -1.42
NUP54-206ENST00000508465 KIR2DL1P43626 348 aaPredicted RBP6.15□□□□□ -1.42
NUP54-206ENST00000508465 KIR2DL2P43627 348 aaPredicted RBP6.15□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms