RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 NNTQ13423 1086 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 TRIM29Q14134 588 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 SYDE2Q5VT97 1194 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 IL23RQ5VWK5 629 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 NXNQ6DKJ4 435 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 CKAP2LQ8IYA6 745 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 AENQ8WTP8 325 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 TCF12Q99081 682 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 CARD14Q9BXL6 1004 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 DRC3Q9H069 523 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 CCDC87Q9NVE4 849 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 CTTNBP2NLQ9P2B4 639 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 SAP30BPQ9UHR5 308 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 TMCC3Q9ULS5 477 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 NUMBLQ9Y6R0 609 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 POGZQ7Z3K3 1410 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 KIAA0586Q9BVV6 1533 aa11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 TARBP1Q13395 1621 aaKnown RBP11.85□□□□□ -0.51
PDLIM5-210ENST00000508216 CHL1O00533 1208 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 LMNB1P20700 586 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 NFKBIAP25963 317 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 WASHC5Q12768 1159 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 DUS1LQ6P1R4 473 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 RUFY4Q6ZNE9 571 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 C11orf57Q6ZUT1 292 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 TRIM50Q86XT4 487 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 MLKLQ8NB16 471 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 CASP10Q92851 521 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 FAM136AQ96C01 138 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 SDCCAG3Q96C92 435 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 IQCDQ96DY2 449 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 SELENOOQ9BVL4 669 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 FAIMQ9NVQ4 179 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 HSFX1Q9UBD0 423 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 SATB2Q9UPW6 733 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 RNF17Q9BXT8 1623 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 SETD1AO15047 1707 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 MATN2O00339 956 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 CALB2P22676 271 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 TUBP50607 506 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 BASP1P80723 227 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 FAM160A1Q05DH4 1040 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 ZBTB17Q13105 803 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 PPP1R7Q15435 360 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 C4orf46Q504U0 113 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 TMEM154Q6P9G4 183 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 CACNA2D3Q8IZS8 1091 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 NOA1Q8NC60 698 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 SYTL4Q96C24 671 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 INO80BQ9C086 356 aaPredicted RBP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 XPO4Q9C0E2 1151 aaKnown RBP11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 GBA3Q9H227 469 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 TPK1Q9H3S4 243 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 CHPF2Q9P2E5 772 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 ZNF180Q9UJW8 692 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 ACAD8Q9UKU7 415 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 TBC1D30Q9Y2I9 924 aa11.84□□□□□ -0.51
PDLIM5-210ENST00000508216 ZC3H13Q5T200 1668 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 OVOS2A0A0G2JMS6 1433 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 OVOS2A0A0J9YW53 1432 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 OVOS2Q6IE36 1432 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 TNFRSF10AO00220 468 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 TEX28O15482 410 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 TSPAN1O60635 241 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 VAMP4O75379 141 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 SERPINB7O75635 380 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 GSTT2P0CG29 244 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 GSTT2BP0CG30 244 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 GNAZP19086 355 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 LRP8Q14114 963 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 PDIA6Q15084 440 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 FOXB2Q5VYV0 432 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 GPR153Q6NV75 609 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 CYP26C1Q6V0L0 522 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 ITPRIPQ8IWB1 547 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 SCUBE1Q8IWY4 988 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 DCLK2Q8N568 766 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 RETREG2Q8NC44 543 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 RBM46Q8TBY0 533 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 RIN2Q8WYP3 895 aaPredicted RBP11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 CCDC42Q96M95 316 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 FAM167BQ9BTA0 163 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 CENPOQ9BU64 300 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 TCF7L2Q9NQB0 619 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 LARSQ9P2J5 1176 aaKnown RBP11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 MTUS1Q9ULD2 1270 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 TMEM94Q12767 1356 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 MAGI2Q86UL8 1455 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 ARHGEF5Q12774 1597 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 MROH7Q68CQ1 1323 aa11.83□□□□□ -0.52
PDLIM5-210ENST00000508216 DNMT1P26358 1616 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 IFIT3O14879 490 aaKnown RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 TNFRSF8P28908 595 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 CDC25CP30307 473 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 COG2Q14746 738 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 SPRED3Q2MJR0 410 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 P3H1Q32P28 736 aa11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 CCNI2Q6ZMN8 369 aaPredicted RBP11.82□□□□□ -0.52
PDLIM5-210ENST00000508216 WAPLQ7Z5K2 1190 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms