RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 CHUKO15111 745 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 FGFR1OPO95684 399 aaKnown RBP19.66■□□□□ 0.74
NUP54-205ENST00000507257 MDH1P40925 334 aaKnown RBP19.66■□□□□ 0.74
NUP54-205ENST00000507257 MAGEA1P43355 309 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 PDE4DQ08499 809 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 CNNM4Q6P4Q7 775 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 ARFGAP2Q8N6H7 521 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 RASSF8Q8NHQ8 419 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 ATP6V1G3Q96LB4 118 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 FAM205AQ6ZU69 1335 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 H0YHG0 523 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 AKR1B10O60218 316 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 FAM107AO95990 144 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 AMPD3Q01432 767 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 ACTN3Q08043 901 aaPredicted RBP19.66■□□□□ 0.74
NUP54-205ENST00000507257 MAN2A1Q16706 1144 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 C6orf89Q6UWU4 347 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 LRIG3Q6UXM1 1119 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 PIK3R5Q8WYR1 880 aa19.66■□□□□ 0.74
NUP54-205ENST00000507257 CCDC43Q96MW1 224 aaKnown RBP19.66■□□□□ 0.74
NUP54-205ENST00000507257 NUCKS1Q9H1E3 243 aaKnown RBP19.66■□□□□ 0.74
NUP54-205ENST00000507257 SLIT2O94813 1529 aa19.65■□□□□ 0.74
NUP54-205ENST00000507257 CCDC194A0A1B0GVG4 234 aa19.65■□□□□ 0.74
NUP54-205ENST00000507257 C21orf2O43822 256 aa19.65■□□□□ 0.74
NUP54-205ENST00000507257 CYP19A1P11511 503 aaPredicted RBP19.65■□□□□ 0.74
NUP54-205ENST00000507257 NLRP14Q86W24 1093 aa19.65■□□□□ 0.74
NUP54-205ENST00000507257 SYN2Q92777 582 aaPredicted RBP19.65■□□□□ 0.74
NUP54-205ENST00000507257 TMEM60Q9H2L4 133 aa19.65■□□□□ 0.74
NUP54-205ENST00000507257 NDST4Q9H3R1 872 aa19.65■□□□□ 0.74
NUP54-205ENST00000507257 ITGB4P16144 1822 aa19.65■□□□□ 0.74
NUP54-205ENST00000507257 CES2O00748 559 aa19.64■□□□□ 0.74
NUP54-205ENST00000507257 ADAMTS3O15072 1205 aa19.64■□□□□ 0.74
NUP54-205ENST00000507257 KIF1CO43896 1103 aaKnown RBP19.64■□□□□ 0.74
NUP54-205ENST00000507257 KRT14P02533 472 aa19.64■□□□□ 0.74
NUP54-205ENST00000507257 HSPA9P38646 679 aaKnown RBP19.64■□□□□ 0.74
NUP54-205ENST00000507257 STK4Q13043 487 aa19.64■□□□□ 0.74
NUP54-205ENST00000507257 TTC19Q6DKK2 380 aaPredicted RBP19.64■□□□□ 0.74
NUP54-205ENST00000507257 SH2D3CQ8N5H7 860 aa19.64■□□□□ 0.74
NUP54-205ENST00000507257 MYCBPAPQ8TBZ2 947 aa19.64■□□□□ 0.74
NUP54-205ENST00000507257 BAP1Q92560 729 aa19.64■□□□□ 0.74
NUP54-205ENST00000507257 ACTR5Q9H9F9 607 aaPredicted RBP19.64■□□□□ 0.74
NUP54-205ENST00000507257 LUC7LQ9NQ29 371 aaKnown RBP19.64■□□□□ 0.74
NUP54-205ENST00000507257 CASZ1Q86V15 1759 aa19.64■□□□□ 0.73
NUP54-205ENST00000507257 GLI1P08151 1106 aa19.64■□□□□ 0.73
NUP54-205ENST00000507257 CCDC172P0C7W6 258 aa19.64■□□□□ 0.73
NUP54-205ENST00000507257 MYBP10242 640 aa19.64■□□□□ 0.73
NUP54-205ENST00000507257 MATR3P43243 847 aaKnown RBP eCLIP19.64■□□□□ 0.731e-9■■■■□ 19.8
NUP54-205ENST00000507257 CARSP49589 748 aaKnown RBP19.64■□□□□ 0.73
NUP54-205ENST00000507257 ITGB3BPQ13352 177 aaPredicted RBP19.64■□□□□ 0.73
NUP54-205ENST00000507257 LRRC15Q8TF66 581 aa19.64■□□□□ 0.73
NUP54-205ENST00000507257 CCT8L2Q96SF2 557 aa19.64■□□□□ 0.73
NUP54-205ENST00000507257 ASAP1Q9ULH1 1129 aa19.64■□□□□ 0.73
NUP54-205ENST00000507257 PP2D1A8MPX8 630 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 SMIM22K7EJ46 135 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 SNAP23O00161 211 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 RASSF9O75901 435 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 HEXIM1O94992 359 aaKnown RBP19.63■□□□□ 0.73
NUP54-205ENST00000507257 PLCG1P19174 1290 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 IL6STP40189 918 aaPredicted RBP19.63■□□□□ 0.73
NUP54-205ENST00000507257 PDXDC1Q6P996 788 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 CABP7Q86V35 215 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 PIGBQ92521 554 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 DDX17Q92841 729 aaKnown RBP19.63■□□□□ 0.73
NUP54-205ENST00000507257 MTMR8Q96EF0 704 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 PLCB1Q9NQ66 1216 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 TCP11L1Q9NUJ3 509 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 SALL4Q9UJQ4 1053 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 NFU1Q9UMS0 254 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 VEGFAP15692 232 aaPredicted RBP19.63■□□□□ 0.73
NUP54-205ENST00000507257 IGHMBP2P38935 993 aaKnown RBP19.63■□□□□ 0.73
NUP54-205ENST00000507257 GNAQP50148 359 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 ATP1A2P50993 1020 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 ORC2Q13416 577 aaPredicted RBP19.63■□□□□ 0.73
NUP54-205ENST00000507257 CDC37Q16543 378 aaPredicted RBP19.63■□□□□ 0.73
NUP54-205ENST00000507257 TAX1BP1Q86VP1 789 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 ANKS1AQ92625 1134 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 SEMA6BQ9H3T3 888 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 RABEP2Q9H5N1 569 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 EPB41L5Q9HCM4 733 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 PCDHA6Q9UN73 950 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 PCDHA8Q9Y5H6 950 aa19.63■□□□□ 0.73
NUP54-205ENST00000507257 KIAA1551Q9HCM1 1747 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 BAZ2BQ9UIF8 2168 aaKnown RBP19.62■□□□□ 0.73
NUP54-205ENST00000507257 LRRC53A6NM62 1247 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 MYO1FO00160 1098 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 LRRC63Q05C16 580 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 CCDC178Q5BJE1 867 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 GPATCH11Q8N954 259 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 KIAA0895Q8NCT3 520 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 MAGEC3Q8TD91 643 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 TMBIM4Q9HC24 238 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 DONSONQ9NYP3 566 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 SCN7AQ01118 1682 aa19.62■□□□□ 0.73
NUP54-205ENST00000507257 CYP2D7A0A087X1C5 515 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 TMCO5BA8MYB1 307 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 EPHB6O15197 1021 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 FAM153BP0C7A2 387 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 CXCR5P32302 372 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 ASIC1P78348 528 aa19.61■□□□□ 0.73
NUP54-205ENST00000507257 FAM153CQ494X1 144 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms