RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 KIR2DL2P43627 348 aaPredicted RBP8.36□□□□□ -1.07
HERC4-213ENST00000506515 NEK4P51957 841 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 RPL11P62913 178 aaKnown RBP8.36□□□□□ -1.07
HERC4-213ENST00000506515 PLCL1Q15111 1095 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 SLC14A2Q15849 920 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 ZC3H7AQ8IWR0 971 aaKnown RBP8.36□□□□□ -1.07
HERC4-213ENST00000506515 CHAC2Q8WUX2 184 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 DDX1Q92499 740 aaKnown RBP8.36□□□□□ -1.07
HERC4-213ENST00000506515 PCDH12Q9NPG4 1184 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 FBXL7Q9UJT9 491 aa8.36□□□□□ -1.07
HERC4-213ENST00000506515 hCG_2014768A0A024R1R8 64 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 A0A1W2PQ27 194 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 A0A1W2PQ45 241 aaPredicted RBP8.35□□□□□ -1.07
HERC4-213ENST00000506515 A0A1W2PQ64 194 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 A0A1W2PQC6 194 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 A0A1W2PQD8 194 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 A0A1W2PQY0 241 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 GSG1L2A8MUP6 293 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 VIL1P09327 827 aaKnown RBP8.35□□□□□ -1.07
HERC4-213ENST00000506515 JMJD7P0C870 316 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 STAT3P40763 770 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 LSAMPQ13449 338 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 KIZQ2M2Z5 673 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 CT47A1Q5JQC4 288 aaPredicted RBP8.35□□□□□ -1.07
HERC4-213ENST00000506515 SLC23A3Q6PIS1 610 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 KRT26Q7Z3Y9 468 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 SLCO6A1Q86UG4 719 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 DPF3Q92784 378 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 CAAP1Q9H8G2 361 aa8.35□□□□□ -1.07
HERC4-213ENST00000506515 PPARGC1AQ9UBK2 798 aaKnown RBP8.35□□□□□ -1.07
HERC4-213ENST00000506515 MYO15BQ96JP2 1530 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 ARVCFO00192 962 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 KPNA6O60684 536 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 ADAM23O75077 832 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 ADAMTS4O75173 837 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 WNT11O96014 354 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 SOD2P04179 222 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 FLT3P36888 993 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 PAK1Q13153 545 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 HSF5Q4G112 596 aaPredicted RBP8.34□□□□□ -1.07
HERC4-213ENST00000506515 ANKRD13AQ8IZ07 590 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 ANKS4BQ8N8V4 417 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 CLDND1Q9NY35 253 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 MARCH2Q9P0N8 246 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 RWDD3Q9Y3V2 267 aa8.34□□□□□ -1.07
HERC4-213ENST00000506515 FAM83GA6ND36 823 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 PPP1R11O60927 126 aaPredicted RBP8.33□□□□□ -1.08
HERC4-213ENST00000506515 SOX5P35711 763 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 GTF2A2P52657 109 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 ERVFC1P60507 584 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 IGBP1P78318 339 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 AMPD3Q01432 767 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 PCBP1Q15365 356 aaKnown RBP eCLIP8.33□□□□□ -1.08
HERC4-213ENST00000506515 CFAP100Q494V2 611 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 PIK3R6Q5UE93 754 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 ABHD17CQ6PCB6 329 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 UBE2R2Q712K3 238 aaPredicted RBP8.33□□□□□ -1.08
HERC4-213ENST00000506515 CEP68Q76N32 757 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 RNF180Q86T96 592 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 SPPL2CQ8IUH8 684 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 TEX2Q8IWB9 1127 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 PPM1KQ8N3J5 372 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 OXR1Q8N573 874 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 PDZD8Q8NEN9 1154 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 PCDH19Q8TAB3 1148 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 LEO1Q8WVC0 666 aaPredicted RBP8.33□□□□□ -1.08
HERC4-213ENST00000506515 TMEM169Q96HH4 297 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 IPPKQ9H8X2 491 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 IMPACTQ9P2X3 320 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 ADAMTS6Q9UKP5 1117 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 MAPRE3Q9UPY8 281 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 NOP58Q9Y2X3 529 aaKnown RBP8.33□□□□□ -1.08
HERC4-213ENST00000506515 COQ6Q9Y2Z9 468 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 TAF6LQ9Y6J9 622 aa8.33□□□□□ -1.08
HERC4-213ENST00000506515 WTIPA6NIX2 430 aaPredicted RBP8.32□□□□□ -1.08
HERC4-213ENST00000506515 B4E1Z4 1266 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 FUCA1P04066 466 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 KCNA6P17658 529 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 FPR2P25090 351 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 GRK2P25098 689 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 GRK3P35626 688 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 ANAPC15P60006 121 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 CHRNEQ04844 493 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 KIR3DS1Q14943 382 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 ZMYM1Q5SVZ6 1142 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 CDCA2Q69YH5 1023 aaPredicted RBP8.32□□□□□ -1.08
HERC4-213ENST00000506515 ZCCHC8Q6NZY4 707 aaKnown RBP8.32□□□□□ -1.08
HERC4-213ENST00000506515 NLRP10Q86W26 655 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 AHI1Q8N157 1196 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 AGBL5Q8NDL9 886 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 USP33Q8TEY7 942 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 TRMT2BQ96GJ1 504 aaKnown RBP8.32□□□□□ -1.08
HERC4-213ENST00000506515 CCDC120Q96HB5 630 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 KCNJ15Q99712 375 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 JAM3Q9BX67 310 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 SAMD15Q9P1V8 674 aa8.32□□□□□ -1.08
HERC4-213ENST00000506515 FITM1A5D6W6 292 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 FAM47E-STBD1D6RA91 191 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 TACR1P25103 407 aa8.31□□□□□ -1.08
HERC4-213ENST00000506515 DNM2P50570 870 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms