RNA–Protein interactions for RNA: ENST00000506023.1

BRIX1-202, Transcript of BRX1, biogenesis of ribosomes, humanhuman

TSL 3

Gene BRIX1, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIX1-202ENST00000506023 POU3F3P20264 500 aaPredicted RBP12.22□□□□□ -0.45
BRIX1-202ENST00000506023 SYDE2Q5VT97 1194 aa12.22□□□□□ -0.45
BRIX1-202ENST00000506023 DHX38Q92620 1227 aaKnown RBP12.22□□□□□ -0.45
BRIX1-202ENST00000506023 FAM227BQ96M60 508 aa12.22□□□□□ -0.45
BRIX1-202ENST00000506023 CD320Q9NPF0 282 aa12.22□□□□□ -0.45
BRIX1-202ENST00000506023 C11orf16Q9NQ32 467 aa12.22□□□□□ -0.45
BRIX1-202ENST00000506023 COL20A1Q9P218 1284 aa12.22□□□□□ -0.45
BRIX1-202ENST00000506023 C5orf42Q9H799 3197 aa12.22□□□□□ -0.45
BRIX1-202ENST00000506023 PTPDC1A2A3K4 754 aa12.21□□□□□ -0.45
BRIX1-202ENST00000506023 ERC2O15083 957 aa12.21□□□□□ -0.45
BRIX1-202ENST00000506023 PDHBP11177 359 aa12.21□□□□□ -0.45
BRIX1-202ENST00000506023 CALML3P27482 149 aa12.21□□□□□ -0.45
BRIX1-202ENST00000506023 RPS6P62753 249 aaKnown RBP12.21□□□□□ -0.45
BRIX1-202ENST00000506023 MKRN4PQ13434 485 aaPredicted RBP12.21□□□□□ -0.45
BRIX1-202ENST00000506023 DIEXFQ68CQ4 756 aaKnown RBP12.21□□□□□ -0.45
BRIX1-202ENST00000506023 ZNF589Q86UQ0 364 aaPredicted RBP12.21□□□□□ -0.45
BRIX1-202ENST00000506023 RPUSD2Q8IZ73 545 aaKnown RBP12.21□□□□□ -0.45
BRIX1-202ENST00000506023 OR6J1Q8NGC5 347 aa12.21□□□□□ -0.45
BRIX1-202ENST00000506023 DCAF4Q8WV16 495 aa12.21□□□□□ -0.45
BRIX1-202ENST00000506023 KAT2BQ92831 832 aa12.21□□□□□ -0.45
BRIX1-202ENST00000506023 WNT8BQ93098 351 aa12.21□□□□□ -0.45
BRIX1-202ENST00000506023 NACAP1Q9BZK3 213 aa12.21□□□□□ -0.45
BRIX1-202ENST00000506023 MTIF3Q9H2K0 278 aaKnown RBP12.21□□□□□ -0.45
BRIX1-202ENST00000506023 A6NJR5 290 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 TLL1O43897 1013 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 ZEB2O60315 1214 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 FGAP02671 866 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 SNHG28P0DPA3 235 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 MX1P20591 662 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 PLA2G5P39877 138 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 DEFB103AP81534 67 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 GRB10Q13322 594 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 HIC1Q14526 733 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 FAM47CQ5HY64 1035 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 TMEM67Q5HYA8 995 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 TBC1D10CQ8IV04 446 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 HERC6Q8IVU3 1022 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 ARNTL2Q8WYA1 636 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 GPATCH3Q96I76 525 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 MTG1Q9BT17 334 aaPredicted RBP12.2□□□□□ -0.46
BRIX1-202ENST00000506023 POLR3EQ9NVU0 708 aa12.2□□□□□ -0.46
BRIX1-202ENST00000506023 GOLGA8HP0CJ92 632 aa12.19□□□□□ -0.46
BRIX1-202ENST00000506023 HAND2P61296 217 aa12.19□□□□□ -0.46
BRIX1-202ENST00000506023 ZNF543Q08ER8 600 aa12.19□□□□□ -0.46
BRIX1-202ENST00000506023 RRP12Q5JTH9 1297 aaKnown RBP12.19□□□□□ -0.46
BRIX1-202ENST00000506023 GDF6Q6KF10 455 aaPredicted RBP12.19□□□□□ -0.46
BRIX1-202ENST00000506023 CCDC62Q6P9F0 684 aa12.19□□□□□ -0.46
BRIX1-202ENST00000506023 TRAF7Q6Q0C0 670 aa12.19□□□□□ -0.46
BRIX1-202ENST00000506023 RNF207Q6ZRF8 634 aa12.19□□□□□ -0.46
BRIX1-202ENST00000506023 SEZ6LQ9BYH1 1024 aa12.19□□□□□ -0.46
BRIX1-202ENST00000506023 CHMP4BQ9H444 224 aaKnown RBP12.19□□□□□ -0.46
BRIX1-202ENST00000506023 MYO7AQ13402 2215 aa12.19□□□□□ -0.46
BRIX1-202ENST00000506023 BAZ2BQ9UIF8 2168 aaKnown RBP12.19□□□□□ -0.46
BRIX1-202ENST00000506023 NEDD4P46934 1319 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 TRIOO75962 3097 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 NBNO60934 754 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 SLC3A2P08195 630 aaKnown RBP12.18□□□□□ -0.46
BRIX1-202ENST00000506023 PFKMP08237 780 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 TOP1P11387 765 aaKnown RBP12.18□□□□□ -0.46
BRIX1-202ENST00000506023 CPT1AP50416 773 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 WDR5P61964 334 aaKnown RBP12.18□□□□□ -0.46
BRIX1-202ENST00000506023 ARHGAP1Q07960 439 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 MBTPS1Q14703 1052 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 PPP2R5BQ15173 497 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 ALX1Q15699 326 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 NFRKBQ6P4R8 1299 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 GDPD5Q8WTR4 605 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 SLC9A7Q96T83 725 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 LRFN3Q9BTN0 628 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 OSBPL7Q9BZF2 842 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 ADD3Q9UEY8 706 aaKnown RBP12.18□□□□□ -0.46
BRIX1-202ENST00000506023 WDFY4Q6ZS81 3184 aa12.18□□□□□ -0.46
BRIX1-202ENST00000506023 MUC6Q6W4X9 2439 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 MMP3P08254 477 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 SUPT20HL2P0C7V6 817 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 TXNP10599 105 aaKnown RBP12.17□□□□□ -0.46
BRIX1-202ENST00000506023 HSPD1P10809 573 aaKnown RBP12.17□□□□□ -0.46
BRIX1-202ENST00000506023 SKIV2LQ15477 1246 aaKnown RBP12.17□□□□□ -0.46
BRIX1-202ENST00000506023 LY6KQ17RY6 165 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 USH1GQ495M9 461 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 AFG1LQ8WV93 481 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 TAAR1Q96RJ0 339 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 ZKSCAN3Q9BRR0 538 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 UBA5Q9GZZ9 404 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 TCP11L1Q9NUJ3 509 aa12.17□□□□□ -0.46
BRIX1-202ENST00000506023 KIAA1671Q9BY89 1806 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 WDR19Q8NEZ3 1342 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 LOC102724159A0A0B4J2E5 919 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 FAM86C2PA6NEL3 165 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 OPLAHO14841 1288 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 RFC2P35250 354 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 CHMP4BP1P59074 171 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 ZNF200P98182 395 aaPredicted RBP12.16□□□□□ -0.46
BRIX1-202ENST00000506023 PDE4DQ08499 809 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 NMIQ13287 307 aaPredicted RBP12.16□□□□□ -0.46
BRIX1-202ENST00000506023 PWP2Q15269 919 aaKnown RBP12.16□□□□□ -0.46
BRIX1-202ENST00000506023 TRIM71Q2Q1W2 868 aaKnown RBP12.16□□□□□ -0.46
BRIX1-202ENST00000506023 PHOSPHO2Q8TCD6 241 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 SCFD2Q8WU76 684 aa12.16□□□□□ -0.46
BRIX1-202ENST00000506023 TOMM22Q9NS69 142 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms