RNA–Protein interactions for RNA: ENST00000505998.5

NIPBL-205, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 969 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-205ENST00000505998 CHAMP1Q96JM3 812 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 KRTAP4-6Q9BYQ5 205 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 GPR27Q9NS67 375 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 MARCH2Q9P0N8 246 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 PCDHA2Q9Y5H9 948 aa8.35□□□□□ -1.07
NIPBL-205ENST00000505998 WIZO95785 1651 aa8.34□□□□□ -1.07
NIPBL-205ENST00000505998 ZNF503-AS2A6NEH8 195 aa8.34□□□□□ -1.07
NIPBL-205ENST00000505998 BICRALQ6AI39 1079 aa8.34□□□□□ -1.07
NIPBL-205ENST00000505998 STYK1Q6J9G0 422 aa8.34□□□□□ -1.07
NIPBL-205ENST00000505998 KCNT2Q6UVM3 1135 aa8.34□□□□□ -1.07
NIPBL-205ENST00000505998 DPF3Q92784 378 aa8.34□□□□□ -1.07
NIPBL-205ENST00000505998 PTPRN2Q92932 1015 aa8.34□□□□□ -1.07
NIPBL-205ENST00000505998 LIN37Q96GY3 246 aaPredicted RBP8.34□□□□□ -1.07
NIPBL-205ENST00000505998 TMEM260Q9NX78 707 aa8.34□□□□□ -1.07
NIPBL-205ENST00000505998 FAM53CQ9NYF3 392 aa8.34□□□□□ -1.07
NIPBL-205ENST00000505998 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.34□□□□□ -1.071e-9■■□□□ 14.4
NIPBL-205ENST00000505998 ESYT3A0FGR9 886 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 PPP1R11O60927 126 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-205ENST00000505998 FUCA1P04066 466 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 BCL6P41182 706 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 GABREP78334 506 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 LSAMPQ13449 338 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 GIMAP6Q6P9H5 292 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 MAMDC2Q7Z304 686 aaPredicted RBP8.33□□□□□ -1.08
NIPBL-205ENST00000505998 CABP7Q86V35 215 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 HOMER1Q86YM7 354 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 IRF2BP1Q8IU81 584 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 ZFYVE21Q9BQ24 234 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 MTA3Q9BTC8 594 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 TNFRSF12AQ9NP84 129 aa8.33□□□□□ -1.08
NIPBL-205ENST00000505998 TMA7Q9Y2S6 64 aaKnown RBP8.33□□□□□ -1.08
NIPBL-205ENST00000505998 OR14I1A6ND48 311 aa8.32□□□□□ -1.08
NIPBL-205ENST00000505998 IQCJ-SCHIP1C9J366 451 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-205ENST00000505998 MPOP05164 745 aa8.32□□□□□ -1.08
NIPBL-205ENST00000505998 C6orf222P0C671 652 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-205ENST00000505998 ERVFRD-1P60508 538 aa8.32□□□□□ -1.08
NIPBL-205ENST00000505998 CEP68Q76N32 757 aa8.32□□□□□ -1.08
NIPBL-205ENST00000505998 TEX2Q8IWB9 1127 aa8.32□□□□□ -1.08
NIPBL-205ENST00000505998 IFNL3Q8IZI9 196 aa8.32□□□□□ -1.08
NIPBL-205ENST00000505998 TMEM169Q96HH4 297 aa8.32□□□□□ -1.08
NIPBL-205ENST00000505998 TRAF6Q9Y4K3 522 aa8.32□□□□□ -1.08
NIPBL-205ENST00000505998 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.32□□□□□ -1.08
NIPBL-205ENST00000505998 TLDC2A0PJX2 215 aa8.31□□□□□ -1.08
NIPBL-205ENST00000505998 C22orf46C9J442 243 aa8.31□□□□□ -1.08
NIPBL-205ENST00000505998 AQP7O14520 342 aa8.31□□□□□ -1.08
NIPBL-205ENST00000505998 MSCO60682 206 aa8.31□□□□□ -1.08
NIPBL-205ENST00000505998 SDHBP21912 280 aa8.31□□□□□ -1.08
NIPBL-205ENST00000505998 GPR85P60893 370 aa8.31□□□□□ -1.08
NIPBL-205ENST00000505998 APPBP2Q92624 585 aa8.31□□□□□ -1.08
NIPBL-205ENST00000505998 TRMT2BQ96GJ1 504 aaKnown RBP8.31□□□□□ -1.08
NIPBL-205ENST00000505998 FANCLQ9NW38 375 aa8.31□□□□□ -1.08
NIPBL-205ENST00000505998 TBX22Q9Y458 520 aa8.31□□□□□ -1.08
NIPBL-205ENST00000505998 ASXL2Q76L83 1435 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 TOP2AP11388 1531 aaKnown RBP8.3□□□□□ -1.08
NIPBL-205ENST00000505998 FPR2P25090 351 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 RAB3GAP1Q15042 981 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 MLANAQ16655 118 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 LBX2Q6XYB7 198 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 PRR23BQ6ZRT6 265 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 NLRP10Q86W26 655 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.3□□□□□ -1.08
NIPBL-205ENST00000505998 PLEKHO2Q8TD55 490 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 MRPL4Q9BYD3 311 aaKnown RBP8.3□□□□□ -1.08
NIPBL-205ENST00000505998 NSUN3Q9H649 340 aaKnown RBP8.3□□□□□ -1.08
NIPBL-205ENST00000505998 NCOA5Q9HCD5 579 aaKnown RBP8.3□□□□□ -1.08
NIPBL-205ENST00000505998 CLDND1Q9NY35 253 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 NDOR1Q9UHB4 597 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 SFMBT1Q9UHJ3 866 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 FBXL7Q9UJT9 491 aa8.3□□□□□ -1.08
NIPBL-205ENST00000505998 LRRC10BA6NIK2 292 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 NUDT19A8MXV4 375 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 H7BY64 318 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 PLD2O14939 933 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 SRGAP3O43295 1099 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 EFCAB14O75071 495 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 ASMTLO95671 621 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 DBHP09172 617 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 NR1I3Q14994 352 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 WWC2Q6AWC2 1192 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 MTDHQ86UE4 582 aaKnown RBP8.29□□□□□ -1.08
NIPBL-205ENST00000505998 DIRC2Q96SL1 478 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.29□□□□□ -1.08
NIPBL-205ENST00000505998 FBLN5Q9UBX5 448 aa8.29□□□□□ -1.08
NIPBL-205ENST00000505998 COA3Q9Y2R0 106 aaPredicted RBP8.29□□□□□ -1.08
NIPBL-205ENST00000505998 CDC45O75419 566 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 CYBBP04839 570 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 APPP05067 770 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 GLI4P10075 376 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 NAT1P18440 290 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 TMEM62Q0P6H9 643 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 TCEA2Q15560 299 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 KIZQ2M2Z5 673 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 PAQR3Q6TCH7 311 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 ZNF605Q86T29 641 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 Q8N1Y9 231 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 SYNPOQ8N3V7 929 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 ALG1Q9BT22 464 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 EPB41L4BQ9H329 900 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 SLC52A2Q9HAB3 445 aa8.28□□□□□ -1.08
NIPBL-205ENST00000505998 DCP1AQ9NPI6 582 aaPredicted RBP8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms