RNA–Protein interactions for RNA: ENST00000505957.1

CPNE4-206, Transcript of copine 4, humanhuman

TSL 3

Gene CPNE4, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-206ENST00000505957 OTOP2Q7RTS6 562 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 LRRC47Q8N1G4 583 aaKnown RBP12.46□□□□□ -0.41
CPNE4-206ENST00000505957 NCOA7Q8NI08 942 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 STAG1Q8WVM7 1258 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 TNPO1Q92973 898 aaKnown RBP12.46□□□□□ -0.41
CPNE4-206ENST00000505957 GMCL1Q96IK5 515 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 GBP4Q96PP9 640 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 NAPBQ9H115 298 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 HOMER2Q9NSB8 354 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 RNF146Q9NTX7 359 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 ANAPC4Q9UJX5 808 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 PCDHA11Q9Y5I1 949 aa12.46□□□□□ -0.41
CPNE4-206ENST00000505957 MYO9BQ13459 2157 aa12.46□□□□□ -0.42
CPNE4-206ENST00000505957 DDX11L8A8MPP1 907 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 DYNC1LI2O43237 492 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-206ENST00000505957 B4GALT4O60513 344 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 PRDM1O75626 825 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 LARGE1O95461 756 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 BRD1O95696 1058 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 PFKMP08237 780 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 SMPD1P17405 629 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 POU3F3P20264 500 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-206ENST00000505957 MCM5P33992 734 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 TDO2P48775 406 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 CCL23P55773 120 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 PDE4BQ07343 736 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 ST3GAL1Q11201 340 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 COL9A3Q14050 684 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-206ENST00000505957 TAPT1Q6NXT6 567 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 Q6ZUG5 572 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 MORC4Q8TE76 937 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 ZNF274Q96GC6 653 aaPredicted RBP12.45□□□□□ -0.42
CPNE4-206ENST00000505957 AGBL1Q96MI9 1066 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 TRERF1Q96PN7 1200 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 TRPV6Q9H1D0 765 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 WNT8AQ9H1J5 351 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 CNNM2Q9H8M5 875 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 SLC4A7Q9Y6M7 1214 aa12.45□□□□□ -0.42
CPNE4-206ENST00000505957 PFKFB2O60825 505 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 TSPY3P0CV98 308 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 TSPY8P0CW00 308 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 BMP1P13497 986 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 MCM4P33991 863 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 SLC1A4P43007 532 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 TRDNQ13061 729 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 AAK1Q2M2I8 961 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 PPP2R2DQ66LE6 453 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 RALYLQ86SE5 291 aaKnown RBP12.44□□□□□ -0.42
CPNE4-206ENST00000505957 TBC1D10CQ8IV04 446 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 GTF3C6Q969F1 213 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 VWCEQ96DN2 955 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 LLPHQ9BRT6 129 aaKnown RBP12.44□□□□□ -0.42
CPNE4-206ENST00000505957 RNF41Q9H4P4 317 aaPredicted RBP12.44□□□□□ -0.42
CPNE4-206ENST00000505957 VTA1Q9NP79 307 aa12.44□□□□□ -0.42
CPNE4-206ENST00000505957 CHD9Q3L8U1 2897 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 LOC102724159A0A0B4J2E5 919 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 APPP05067 770 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 SLC3A2P08195 630 aaKnown RBP12.43□□□□□ -0.42
CPNE4-206ENST00000505957 FGRP09769 529 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 SUPT20HL2P0C7V6 817 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 ATP2A2P16615 1042 aaKnown RBP12.43□□□□□ -0.42
CPNE4-206ENST00000505957 PLA2G5P39877 138 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 RABGGTBP53611 331 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 PWP2Q15269 919 aaKnown RBP12.43□□□□□ -0.42
CPNE4-206ENST00000505957 RCSD1Q6JBY9 416 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 TMEM87BQ96K49 555 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 C1QTNF1Q9BXJ1 281 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 PDGFCQ9NRA1 345 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 CYP39A1Q9NYL5 469 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 SMC3Q9UQE7 1217 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 MCM3APO60318 1980 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 NID2Q14112 1375 aa12.43□□□□□ -0.42
CPNE4-206ENST00000505957 ALAS1P13196 640 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 ANTXR2P58335 489 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 HAND2P61296 217 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 PSMC6P62333 389 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 TFAP4Q01664 338 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 IKQ13123 557 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-206ENST00000505957 DUSP28Q4G0W2 176 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 CCDC83Q8IWF9 413 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 FBXO16Q8IX29 292 aaPredicted RBP12.42□□□□□ -0.42
CPNE4-206ENST00000505957 RGS22Q8NE09 1264 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 BRF1Q92994 677 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 KRT23Q9C075 422 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 POLR3EQ9NVU0 708 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 RAPGEFL1Q9UHV5 662 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 ZDHHC9Q9Y397 364 aa12.42□□□□□ -0.42
CPNE4-206ENST00000505957 ZBBXA8MT70 800 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 PRC1O43663 620 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 MYOGP15173 224 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 PDCP20941 246 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 RFC2P35250 354 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 RCAN1P53805 252 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 PPARAQ07869 468 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 NBR1Q14596 966 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 MUM1L1Q5H9M0 696 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 TMEM67Q5HYA8 995 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 EEPD1Q7L9B9 569 aa12.41□□□□□ -0.42
CPNE4-206ENST00000505957 SGMS1Q86VZ5 419 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms