RNA–Protein interactions for RNA: ENST00000504872.5

APBB3-209, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 4

Gene APBB3, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-209ENST00000504872 CCDC82Q8N4S0 544 aa12.4□□□□□ -0.42
APBB3-209ENST00000504872 RRP36Q96EU6 259 aaKnown RBP12.4□□□□□ -0.42
APBB3-209ENST00000504872 LARP6Q9BRS8 491 aaKnown RBP12.4□□□□□ -0.42
APBB3-209ENST00000504872 TINF2Q9BSI4 451 aa12.4□□□□□ -0.42
APBB3-209ENST00000504872 HOMER2Q9NSB8 354 aa12.4□□□□□ -0.42
APBB3-209ENST00000504872 V9GY48 417 aaPredicted RBP12.4□□□□□ -0.42
APBB3-209ENST00000504872 BAZ2BQ9UIF8 2168 aaKnown RBP12.4□□□□□ -0.42
APBB3-209ENST00000504872 PFASO15067 1338 aa12.39□□□□□ -0.43
APBB3-209ENST00000504872 CNTNAP5Q8WYK1 1306 aa12.39□□□□□ -0.43
APBB3-209ENST00000504872 PFKFB2O60825 505 aa12.39□□□□□ -0.43
APBB3-209ENST00000504872 INHAP05111 366 aa12.39□□□□□ -0.43
APBB3-209ENST00000504872 METAP2P50579 478 aaKnown RBP eCLIP12.39□□□□□ -0.43
APBB3-209ENST00000504872 RPS6P62753 249 aaKnown RBP12.39□□□□□ -0.43
APBB3-209ENST00000504872 ANKRD1Q15327 319 aa12.39□□□□□ -0.43
APBB3-209ENST00000504872 USH1GQ495M9 461 aa12.39□□□□□ -0.43
APBB3-209ENST00000504872 PIAS4Q8N2W9 510 aaPredicted RBP12.39□□□□□ -0.43
APBB3-209ENST00000504872 TRPV1Q8NER1 839 aa12.39□□□□□ -0.43
APBB3-209ENST00000504872 KATNBL1Q9H079 304 aa12.39□□□□□ -0.43
APBB3-209ENST00000504872 PAK6Q9NQU5 681 aaPredicted RBP12.39□□□□□ -0.43
APBB3-209ENST00000504872 NRBP1Q9UHY1 535 aa12.39□□□□□ -0.43
APBB3-209ENST00000504872 DHX16O60231 1041 aaKnown RBP12.38□□□□□ -0.43
APBB3-209ENST00000504872 CYBAP13498 195 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 EDNRBP24530 442 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 CYP2C19P33261 490 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 UBXN2AP68543 259 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 CCT2P78371 535 aaKnown RBP12.38□□□□□ -0.43
APBB3-209ENST00000504872 ME3Q16798 604 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 RNF207Q6ZRF8 634 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 HOMER1Q86YM7 354 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 MCF2L2Q86YR7 1114 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 DNERQ8NFT8 737 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 SYTL5Q8TDW5 730 aaPredicted RBP12.38□□□□□ -0.43
APBB3-209ENST00000504872 PURBQ96QR8 312 aaKnown RBP12.38□□□□□ -0.43
APBB3-209ENST00000504872 NCOA5Q9HCD5 579 aaKnown RBP12.38□□□□□ -0.43
APBB3-209ENST00000504872 CWC22Q9HCG8 908 aaKnown RBP12.38□□□□□ -0.43
APBB3-209ENST00000504872 COL20A1Q9P218 1284 aa12.38□□□□□ -0.43
APBB3-209ENST00000504872 hCG_1642624A0A1W2PR95 340 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 PIK3CDO00329 1044 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 MEIS2O14770 477 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 ZNF865P0CJ78 1059 aaPredicted RBP12.37□□□□□ -0.43
APBB3-209ENST00000504872 CAPN2P17655 700 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 SCRN1Q12765 414 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 MFSD14CQ5VZR4 134 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 LHX8Q68G74 356 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 TYW1BQ6NUM6 668 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 TEX2Q8IWB9 1127 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 TAAR1Q96RJ0 339 aa12.37□□□□□ -0.43
APBB3-209ENST00000504872 RNF26Q9BY78 433 aaPredicted RBP12.37□□□□□ -0.43
APBB3-209ENST00000504872 HMX1Q9NP08 348 aaPredicted RBP12.37□□□□□ -0.43
APBB3-209ENST00000504872 TCF20Q9UGU0 1960 aaKnown RBP12.37□□□□□ -0.43
APBB3-209ENST00000504872 ASB14A6NK59 587 aa12.36□□□□□ -0.43
APBB3-209ENST00000504872 hCG_1984214I3L0E3 225 aa12.36□□□□□ -0.43
APBB3-209ENST00000504872 LARGE1O95461 756 aa12.36□□□□□ -0.43
APBB3-209ENST00000504872 CTDNEP1O95476 244 aa12.36□□□□□ -0.43
APBB3-209ENST00000504872 PRKAR2AP13861 404 aaKnown RBP12.36□□□□□ -0.43
APBB3-209ENST00000504872 RABEP1Q15276 862 aa12.36□□□□□ -0.43
APBB3-209ENST00000504872 PFKFB3Q16875 520 aaPredicted RBP12.36□□□□□ -0.43
APBB3-209ENST00000504872 PRAMEF19Q5SWL8 479 aa12.36□□□□□ -0.43
APBB3-209ENST00000504872 SLC30A10Q6XR72 485 aa12.36□□□□□ -0.43
APBB3-209ENST00000504872 ZNF713Q8N859 430 aaPredicted RBP12.36□□□□□ -0.43
APBB3-209ENST00000504872 ATXN2LQ8WWM7 1075 aaKnown RBP12.36□□□□□ -0.43
APBB3-209ENST00000504872 KHSRPQ92945 711 aaKnown RBP eCLIP12.36□□□□□ -0.43
APBB3-209ENST00000504872 BARHL2Q9NY43 387 aa12.36□□□□□ -0.43
APBB3-209ENST00000504872 RBM47A0AV96 593 aaKnown RBP12.35□□□□□ -0.43
APBB3-209ENST00000504872 PTPDC1A2A3K4 754 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 FAM86C2PA6NEL3 165 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 STXBP3O00186 592 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 FDPSP14324 419 aaKnown RBP12.35□□□□□ -0.43
APBB3-209ENST00000504872 CCND3P30281 292 aaPredicted RBP12.35□□□□□ -0.43
APBB3-209ENST00000504872 ALDH5A1P51649 535 aaPredicted RBP12.35□□□□□ -0.43
APBB3-209ENST00000504872 ST3GAL1Q11201 340 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 GRIN2CQ14957 1233 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 WWC2Q6AWC2 1192 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 TAPT1Q6NXT6 567 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 ARMCX2Q7L311 632 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 PIBF1Q8WXW3 757 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 PHKBQ93100 1093 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 SLKQ9H2G2 1235 aaPredicted RBP12.35□□□□□ -0.43
APBB3-209ENST00000504872 ABHD16BQ9H3Z7 469 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 UPF2Q9HAU5 1272 aaKnown RBP12.35□□□□□ -0.43
APBB3-209ENST00000504872 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.35□□□□□ -0.43
APBB3-209ENST00000504872 ADD3Q9UEY8 706 aaKnown RBP12.35□□□□□ -0.43
APBB3-209ENST00000504872 SEC63Q9UGP8 760 aaKnown RBP12.35□□□□□ -0.43
APBB3-209ENST00000504872 LIMCH1Q9UPQ0 1083 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 XIRP2A4UGR9 3374 aa12.35□□□□□ -0.43
APBB3-209ENST00000504872 SEPT4O43236 478 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 CFBP00751 764 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 SCG2P13521 617 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 NKX3-2P78367 333 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 STK3Q13188 491 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 ACVR2BQ13705 512 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 TMEM31Q5JXX7 168 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 C9orf50Q5SZB4 431 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 NSUN6Q8TEA1 469 aaKnown RBP12.34□□□□□ -0.43
APBB3-209ENST00000504872 ZSCAN31Q96LW9 406 aaPredicted RBP12.34□□□□□ -0.43
APBB3-209ENST00000504872 IWS1Q96ST2 819 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 ZMYND12Q9H0C1 365 aa12.34□□□□□ -0.43
APBB3-209ENST00000504872 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.34□□□□□ -0.43
APBB3-209ENST00000504872 PSTPIP2Q9H939 334 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms