RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 TMEM39AQ9NV64 488 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 POLR3EQ9NVU0 708 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 CXXC1Q9P0U4 656 aaPredicted RBP4.46□□□□□ -1.7
USP46-205ENST00000504078 LRP2BPQ9P2M1 347 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 HERC5Q9UII4 1024 aaKnown RBP4.46□□□□□ -1.7
USP46-205ENST00000504078 RABGAP1Q9Y3P9 1069 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 XIRP2A4UGR9 3374 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 PARP14Q460N5 1801 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 SYNRGQ9UMZ2 1314 aa4.46□□□□□ -1.7
USP46-205ENST00000504078 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 EPOPA6NHQ4 379 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 ZBBXA8MT70 800 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 USP17L15C9J2P7 530 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 USP17L13C9JLJ4 530 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 USP17L11C9JVI0 530 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 USP17L18D6R9N7 530 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 USP17L22D6RA61 530 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 USP17L17D6RBQ6 530 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 USP17L19D6RCP7 530 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 USP17L20D6RJB6 530 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 MPHOSPH10O00566 681 aaKnown RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 ADCY6O43306 1168 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 DYRK3O43781 588 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 RAD21O60216 631 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 GLRX3O76003 335 aaKnown RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 CIAO1O76071 339 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 HLA-DOAP06340 250 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 SPATA31C1P0DKV0 1188 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 RARBP10826 455 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 EPXP11678 715 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 CYP2C18P33260 490 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 PDE4DQ08499 809 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 FAAP100Q0VG06 881 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 USP17L24Q0WX57 530 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 LRP8Q14114 963 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 MVPQ14764 893 aaKnown RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 KIAA1755Q5JYT7 1200 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 TMEM240Q5SV17 173 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 GORABQ5T7V8 394 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 SPTY2D1Q68D10 685 aaPredicted RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 SPICE1Q8N0Z3 855 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 SPATA5Q8NB90 893 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 SLC44A5Q8NCS7 719 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 ARRDC4Q8NCT1 418 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 PPP1R13LQ8WUF5 828 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 ATXN2LQ8WWM7 1075 aaKnown RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 SSH1Q8WYL5 1049 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 ANKS1AQ92625 1134 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 MAML3Q96JK9 1138 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 UIMC1Q96RL1 719 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 GRIP2Q9C0E4 1043 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 BCL11AQ9H165 835 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 C11orf16Q9NQ32 467 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 PIH1D3Q9NQM4 214 aaKnown RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 STARD7Q9NQZ5 370 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 SMC4Q9NTJ3 1288 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 TLR7Q9NYK1 1049 aaKnown RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 ZHX1Q9UKY1 873 aaPredicted RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 TNNQ9UQP3 1299 aa4.45□□□□□ -1.7
USP46-205ENST00000504078 DDX49Q9Y6V7 483 aaKnown RBP4.45□□□□□ -1.7
USP46-205ENST00000504078 A0A1W2PRG0 241 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 A0A1W2PRU2 124 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 ESPNB1AK53 854 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 C19orf81C9J6K1 198 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 KIAA0355O15063 1070 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 HOXC6P09630 235 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 CYP2D6P10635 497 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 BMP4P12644 408 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 GUCY1A2P33402 732 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 IL15P40933 162 aaPredicted RBP4.44□□□□□ -1.7
USP46-205ENST00000504078 TXKP42681 527 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 USP5P45974 858 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 CCL23P55773 120 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 GSTO1P78417 241 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 SEPT2Q15019 361 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 TMEM31Q5JXX7 168 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 OLFML2BQ68BL8 750 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 CATSPERGQ6ZRH7 1159 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 ZNF365Q70YC5 407 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 C16orf59Q7L2K0 433 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 OTOP2Q7RTS6 562 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 TAS1R3Q7RTX0 852 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 GTF3C2Q8WUA4 911 aaPredicted RBP4.44□□□□□ -1.7
USP46-205ENST00000504078 VTI1AQ96AJ9 217 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 C12orf42Q96LP6 360 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 MMP19Q99542 508 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 DBNDD2Q9BQY9 259 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 SPATC1LQ9H0A9 340 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 FBXO28Q9NVF7 368 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 PI4KBQ9UBF8 816 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 TBX21Q9UL17 535 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 ATXN7L1Q9ULK2 861 aaPredicted RBP4.44□□□□□ -1.7
USP46-205ENST00000504078 TACC3Q9Y6A5 838 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 MYH8P13535 1937 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 PTPRCP08575 1304 aa4.44□□□□□ -1.7
USP46-205ENST00000504078 PDS5AQ29RF7 1337 aaKnown RBP4.44□□□□□ -1.7
USP46-205ENST00000504078 CHD7Q9P2D1 2997 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 DCDC2CA8MYV0 355 aa4.43□□□□□ -1.7
USP46-205ENST00000504078 SMIM22K7EJ46 135 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms