RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 LCP1P13796 627 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 SDHBP21912 280 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 GTF2A2P52657 109 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 MLANAQ16655 118 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 BICRALQ6AI39 1079 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 PRR23BQ6ZRT6 265 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 SH3TC2Q8TF17 1288 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 KISS1RQ969F8 398 aaPredicted RBP8.62□□□□□ -1.03
NIPBL-203ENST00000503274 DIRC2Q96SL1 478 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 PHF20Q9BVI0 1012 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 TNFRSF12AQ9NP84 129 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 GPR27Q9NS67 375 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 MRPS23Q9Y3D9 190 aaKnown RBP8.62□□□□□ -1.03
NIPBL-203ENST00000503274 PCDHA2Q9Y5H9 948 aa8.62□□□□□ -1.03
NIPBL-203ENST00000503274 CCDC163A0A0D9SF12 145 aa8.61□□□□□ -1.03
NIPBL-203ENST00000503274 NOP9Q86U38 636 aaKnown RBP8.61□□□□□ -1.03
NIPBL-203ENST00000503274 USP33Q8TEY7 942 aa8.61□□□□□ -1.03
NIPBL-203ENST00000503274 NSUN3Q9H649 340 aaKnown RBP8.61□□□□□ -1.03
NIPBL-203ENST00000503274 BTG4Q9NY30 223 aa8.61□□□□□ -1.03
NIPBL-203ENST00000503274 MARCH2Q9P0N8 246 aa8.61□□□□□ -1.03
NIPBL-203ENST00000503274 FUCA1P04066 466 aa8.6□□□□□ -1.03
NIPBL-203ENST00000503274 BCL6P41182 706 aa8.6□□□□□ -1.03
NIPBL-203ENST00000503274 STYK1Q6J9G0 422 aa8.6□□□□□ -1.03
NIPBL-203ENST00000503274 KCNT2Q6UVM3 1135 aa8.6□□□□□ -1.03
NIPBL-203ENST00000503274 CABP7Q86V35 215 aa8.6□□□□□ -1.03
NIPBL-203ENST00000503274 ZFYVE21Q9BQ24 234 aa8.6□□□□□ -1.03
NIPBL-203ENST00000503274 EPB41L4BQ9H329 900 aa8.6□□□□□ -1.03
NIPBL-203ENST00000503274 ZNF552Q9H707 407 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-203ENST00000503274 DCP1AQ9NPI6 582 aaPredicted RBP8.6□□□□□ -1.03
NIPBL-203ENST00000503274 SRGAP3O43295 1099 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 LSAMPQ13449 338 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 SQSTM1Q13501 440 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 RAB3GAP1Q15042 981 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 CEP68Q76N32 757 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 TEX2Q8IWB9 1127 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 PLEKHO2Q8TD55 490 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 CHAMP1Q96JM3 812 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 RNPC3Q96LT9 517 aaKnown RBP8.59□□□□□ -1.03
NIPBL-203ENST00000503274 KANSL2Q9H9L4 492 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 FBLN5Q9UBX5 448 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 MYO15BQ96JP2 1530 aa8.59□□□□□ -1.03
NIPBL-203ENST00000503274 NUDT19A8MXV4 375 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 C22orf46C9J442 243 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 MSCO60682 206 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 CYBBP04839 570 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 DBHP09172 617 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 GLI4P10075 376 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 GABREP78334 506 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 NR1I3Q14994 352 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 PAQR3Q6TCH7 311 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 ZNF605Q86T29 641 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 PTPRN2Q92932 1015 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 TMEM169Q96HH4 297 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 KLHL14Q9P2G3 628 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 FBXL7Q9UJT9 491 aa8.58□□□□□ -1.04
NIPBL-203ENST00000503274 ABLIM1O14639 778 aa8.57□□□□□ -1.04
NIPBL-203ENST00000503274 C6orf222P0C671 652 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-203ENST00000503274 GPR85P60893 370 aa8.57□□□□□ -1.04
NIPBL-203ENST00000503274 YBX1P67809 324 aaKnown RBP8.57□□□□□ -1.04
NIPBL-203ENST00000503274 TMEM62Q0P6H9 643 aa8.57□□□□□ -1.04
NIPBL-203ENST00000503274 CBX2Q14781 532 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-203ENST00000503274 MAMDC2Q7Z304 686 aaPredicted RBP8.57□□□□□ -1.04
NIPBL-203ENST00000503274 NLRP10Q86W26 655 aa8.57□□□□□ -1.04
NIPBL-203ENST00000503274 IFNL3Q8IZI9 196 aa8.57□□□□□ -1.04
NIPBL-203ENST00000503274 TRMT2BQ96GJ1 504 aaKnown RBP8.57□□□□□ -1.04
NIPBL-203ENST00000503274 TRAF6Q9Y4K3 522 aa8.57□□□□□ -1.04
NIPBL-203ENST00000503274 ASXL2Q76L83 1435 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 H7BY64 318 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 HRKO00198 91 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 AQP7O14520 342 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 FPR2P25090 351 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 OLFML2BQ68BL8 750 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 WWC2Q6AWC2 1192 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 LBX2Q6XYB7 198 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 Q8N1Y9 231 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 NETO2Q8NC67 525 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.56□□□□□ -1.04
NIPBL-203ENST00000503274 TMEM260Q9NX78 707 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 CLDND1Q9NY35 253 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 X6R8D5 127 aa8.56□□□□□ -1.04
NIPBL-203ENST00000503274 F8W031 263 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-203ENST00000503274 PEX10O60683 326 aa8.55□□□□□ -1.04
NIPBL-203ENST00000503274 NTRK1P04629 796 aa8.55□□□□□ -1.04
NIPBL-203ENST00000503274 MAPKAPK2P49137 400 aa8.55□□□□□ -1.04
NIPBL-203ENST00000503274 RPTNQ6XPR3 784 aa8.55□□□□□ -1.04
NIPBL-203ENST00000503274 JAZF1Q86VZ6 243 aa8.55□□□□□ -1.04
NIPBL-203ENST00000503274 FBXO15Q8NCQ5 510 aaPredicted RBP8.55□□□□□ -1.04
NIPBL-203ENST00000503274 KCNK12Q9HB15 430 aa8.55□□□□□ -1.04
NIPBL-203ENST00000503274 MRPL42Q9Y6G3 142 aaKnown RBP8.55□□□□□ -1.04
NIPBL-203ENST00000503274 ESYT3A0FGR9 886 aa8.54□□□□□ -1.04
NIPBL-203ENST00000503274 ZC3H12DA2A288 527 aaKnown RBP8.54□□□□□ -1.04
NIPBL-203ENST00000503274 FARP2O94887 1054 aaPredicted RBP8.54□□□□□ -1.04
NIPBL-203ENST00000503274 KIZQ2M2Z5 673 aa8.54□□□□□ -1.04
NIPBL-203ENST00000503274 MROH9Q5TGP6 573 aa8.54□□□□□ -1.04
NIPBL-203ENST00000503274 OGFOD2Q6N063 350 aa8.54□□□□□ -1.04
NIPBL-203ENST00000503274 RIOX2Q8IUF8 465 aa8.54□□□□□ -1.04
NIPBL-203ENST00000503274 MRPL4Q9BYD3 311 aaKnown RBP8.54□□□□□ -1.04
NIPBL-203ENST00000503274 DBR1Q9UK59 544 aaKnown RBP8.54□□□□□ -1.04
NIPBL-203ENST00000503274 NUDT5Q9UKK9 219 aa8.54□□□□□ -1.04
NIPBL-203ENST00000503274 COA3Q9Y2R0 106 aaPredicted RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms