RNA–Protein interactions for RNA: ENST00000502971.5

PTPN13-205, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 1 (best) BASIC

Gene PTPN13, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-205ENST00000502971 ZKSCAN5Q9Y2L8 839 aa24.78■■□□□ 1.56
PTPN13-205ENST00000502971 WDR90Q96KV7 1748 aa24.78■■□□□ 1.56
PTPN13-205ENST00000502971 PNMA8AQ86V59 439 aaPredicted RBP24.78■■□□□ 1.56
PTPN13-205ENST00000502971 ENOX1Q8TC92 643 aaKnown RBP24.78■■□□□ 1.56
PTPN13-205ENST00000502971 GCOM1H8Y6P7 765 aaPredicted RBP24.77■■□□□ 1.56
PTPN13-205ENST00000502971 ICAM1P05362 532 aa24.77■■□□□ 1.56
PTPN13-205ENST00000502971 CYP3A4P08684 503 aa24.77■■□□□ 1.56
PTPN13-205ENST00000502971 POLR2MP0CAP2 368 aa24.77■■□□□ 1.56
PTPN13-205ENST00000502971 TAL1P17542 331 aaPredicted RBP24.77■■□□□ 1.56
PTPN13-205ENST00000502971 CIITAP33076 1130 aa24.77■■□□□ 1.56
PTPN13-205ENST00000502971 Q4G0T1 1027 aa24.77■■□□□ 1.56
PTPN13-205ENST00000502971 LDHDQ86WU2 507 aa24.77■■□□□ 1.56
PTPN13-205ENST00000502971 SLFN12Q8IYM2 578 aa24.77■■□□□ 1.56
PTPN13-205ENST00000502971 KCNMB3Q9NPA1 279 aa24.77■■□□□ 1.56
PTPN13-205ENST00000502971 TBX3O15119 743 aa24.76■■□□□ 1.55
PTPN13-205ENST00000502971 RPN1P04843 607 aaKnown RBP24.76■■□□□ 1.55
PTPN13-205ENST00000502971 PTPRAP18433 802 aa24.76■■□□□ 1.55
PTPN13-205ENST00000502971 MSNP26038 577 aaKnown RBP24.76■■□□□ 1.55
PTPN13-205ENST00000502971 MTMR2Q13614 643 aa24.76■■□□□ 1.55
PTPN13-205ENST00000502971 PRAMEF18Q5VWM3 479 aa24.76■■□□□ 1.55
PTPN13-205ENST00000502971 KRT79Q5XKE5 535 aa24.76■■□□□ 1.55
PTPN13-205ENST00000502971 DRC7Q8IY82 874 aa24.76■■□□□ 1.55
PTPN13-205ENST00000502971 SPC24Q8NBT2 197 aa24.76■■□□□ 1.55
PTPN13-205ENST00000502971 EMILIN3Q9NT22 766 aa24.76■■□□□ 1.55
PTPN13-205ENST00000502971 PCDHA12Q9UN75 941 aa24.76■■□□□ 1.55
PTPN13-205ENST00000502971 SLC26A4O43511 780 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 HOXA13P31271 388 aaPredicted RBP24.75■■□□□ 1.55
PTPN13-205ENST00000502971 BACE1P56817 501 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 ZNF280CQ8ND82 737 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 KLRG1Q96E93 195 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 PLIN2Q99541 437 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 HSD3B7Q9H2F3 369 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 TAF1DQ9H5J8 278 aaPredicted RBP24.75■■□□□ 1.55
PTPN13-205ENST00000502971 EHMT1Q9H9B1 1298 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 RRAGDQ9NQL2 400 aaPredicted RBP24.75■■□□□ 1.55
PTPN13-205ENST00000502971 STK17AQ9UEE5 414 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 CFBP00751 764 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 AMPD3Q01432 767 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 SPP2Q13103 211 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 NOL9Q5SY16 702 aaKnown RBP24.75■■□□□ 1.55
PTPN13-205ENST00000502971 ZKSCAN4Q969J2 545 aaPredicted RBP24.75■■□□□ 1.55
PTPN13-205ENST00000502971 PNMA2Q9UL42 364 aa24.75■■□□□ 1.55
PTPN13-205ENST00000502971 POTECB2RU33 542 aa24.74■■□□□ 1.55
PTPN13-205ENST00000502971 VCAM1P19320 739 aa24.74■■□□□ 1.55
PTPN13-205ENST00000502971 KCNB1Q14721 858 aa24.74■■□□□ 1.55
PTPN13-205ENST00000502971 DCPSQ96C86 337 aaKnown RBP24.74■■□□□ 1.55
PTPN13-205ENST00000502971 CDK5RAP3Q96JB5 506 aa24.74■■□□□ 1.55
PTPN13-205ENST00000502971 TANGO6Q9C0B7 1094 aa24.74■■□□□ 1.55
PTPN13-205ENST00000502971 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.74■■□□□ 1.55
PTPN13-205ENST00000502971 POTEMA6NI47 508 aa24.73■■□□□ 1.55
PTPN13-205ENST00000502971 FDX1P10109 184 aa24.73■■□□□ 1.55
PTPN13-205ENST00000502971 FMR1Q06787 632 aaKnown RBP eCLIP24.73■■□□□ 1.55
PTPN13-205ENST00000502971 GRB10Q13322 594 aa24.73■■□□□ 1.55
PTPN13-205ENST00000502971 ZNF658Q5TYW1 1059 aaPredicted RBP24.73■■□□□ 1.55
PTPN13-205ENST00000502971 SAMD1Q6SPF0 538 aaPredicted RBP24.73■■□□□ 1.55
PTPN13-205ENST00000502971 SNX29Q8TEQ0 813 aa24.73■■□□□ 1.55
PTPN13-205ENST00000502971 LRRC15Q8TF66 581 aa24.73■■□□□ 1.55
PTPN13-205ENST00000502971 CCPG1Q9ULG6 757 aa24.73■■□□□ 1.55
PTPN13-205ENST00000502971 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.73■■□□□ 1.55
PTPN13-205ENST00000502971 ZNF536O15090 1300 aa24.73■■□□□ 1.55
PTPN13-205ENST00000502971 SSC5DA1L4H1 1573 aa24.73■■□□□ 1.55
PTPN13-205ENST00000502971 C19orf81C9J6K1 198 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 FCHSD1Q86WN1 690 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 C12orf42Q96LP6 360 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 PNMA5Q96PV4 448 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 C7orf25Q9BPX7 421 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 SLC38A10Q9HBR0 1119 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 FANCLQ9NW38 375 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 PPP1R9AQ9ULJ8 1098 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 PPP1R3GB7ZBB8 358 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 FLOT1O75955 427 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 FANCCQ00597 558 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 PRR16Q569H4 304 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 ETNPPLQ8TBG4 499 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 FAM20AQ96MK3 541 aa24.72■■□□□ 1.55
PTPN13-205ENST00000502971 RPAP3Q9H6T3 665 aaPredicted RBP24.72■■□□□ 1.55
PTPN13-205ENST00000502971 TMEM119Q4V9L6 283 aa24.71■■□□□ 1.55
PTPN13-205ENST00000502971 TBC1D5Q92609 795 aa24.71■■□□□ 1.55
PTPN13-205ENST00000502971 CCDC47Q96A33 483 aaKnown RBP24.71■■□□□ 1.55
PTPN13-205ENST00000502971 LENG9Q96B70 501 aa24.71■■□□□ 1.55
PTPN13-205ENST00000502971 AGBL1Q96MI9 1066 aa24.71■■□□□ 1.55
PTPN13-205ENST00000502971 GTPBP4Q9BZE4 634 aaKnown RBP24.71■■□□□ 1.55
PTPN13-205ENST00000502971 NFE2L3Q9Y4A8 694 aa24.71■■□□□ 1.55
PTPN13-205ENST00000502971 STK24Q9Y6E0 443 aa24.71■■□□□ 1.55
PTPN13-205ENST00000502971 KDM3AQ9Y4C1 1321 aa24.71■■□□□ 1.55
PTPN13-205ENST00000502971 FAM86B1E9PN63 330 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 FAM86B2P0C5J1 330 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 CD44P16070 742 aaKnown RBP24.7■■□□□ 1.54
PTPN13-205ENST00000502971 ZNF76P36508 570 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 HYIQ5T013 277 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 SV2BQ7L1I2 683 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 MCF2L2Q86YR7 1114 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 SULF1Q8IWU6 871 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 SAMD3Q8N6K7 520 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 LRRC27Q9C0I9 530 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 IFNKQ9P0W0 207 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 ZHX2Q9Y6X8 837 aa24.7■■□□□ 1.54
PTPN13-205ENST00000502971 CBFA2T2O43439 604 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 KLRC4O43908 158 aa24.69■■□□□ 1.54
PTPN13-205ENST00000502971 HSD17B4P51659 736 aa24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms