RNA–Protein interactions for RNA: ENST00000502588.5

TNFRSF25-216, Transcript of TNF receptor superfamily member 25, humanhuman

TSL 1 (best)

Gene TNFRSF25, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25-216ENST00000502588 ERICH2A1L162 156 aa26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 ZBTB5O15062 677 aa26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 ZEB2O60315 1214 aa26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 CABYRO75952 493 aa26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 EIF2AK2P19525 551 aaKnown RBP26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 SCFD2Q8WU76 684 aa26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 RMDN3Q96TC7 470 aa26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 TRPV6Q9H1D0 765 aa26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 RIOX1Q9H6W3 641 aa26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 LY9Q9HBG7 655 aa26.44■■□□□ 1.82
TNFRSF25-216ENST00000502588 SLC27A2O14975 620 aa26.43■■□□□ 1.82
TNFRSF25-216ENST00000502588 MYL3P08590 195 aa26.43■■□□□ 1.82
TNFRSF25-216ENST00000502588 TXNP10599 105 aaKnown RBP26.43■■□□□ 1.82
TNFRSF25-216ENST00000502588 CYP2C18P33260 490 aa26.43■■□□□ 1.82
TNFRSF25-216ENST00000502588 PURAQ00577 322 aaKnown RBP26.43■■□□□ 1.82
TNFRSF25-216ENST00000502588 MCF2L2Q86YR7 1114 aa26.43■■□□□ 1.82
TNFRSF25-216ENST00000502588 FAM161BQ96MY7 647 aa26.43■■□□□ 1.82
TNFRSF25-216ENST00000502588 MPHOSPH6Q99547 160 aaKnown RBP26.43■■□□□ 1.82
TNFRSF25-216ENST00000502588 SCN5AQ14524 2016 aa26.43■■□□□ 1.82
TNFRSF25-216ENST00000502588 GBF1Q92538 1859 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 TLR3O15455 904 aaKnown RBP26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 B4GALT4O60513 344 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 CSF2RAP15509 400 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 HSD17B4P51659 736 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 SART3Q15020 963 aaKnown RBP26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 MFSD5Q6N075 450 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 CCDC62Q6P9F0 684 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 SEPT14Q6ZU15 432 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 C16orf59Q7L2K0 433 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 NSUN6Q8TEA1 469 aaKnown RBP26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 PIBF1Q8WXW3 757 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 RNPC3Q96LT9 517 aaKnown RBP26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 PXMP2Q9NR77 195 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 PCDHA1Q9Y5I3 950 aa26.42■■□□□ 1.82
TNFRSF25-216ENST00000502588 DOCK5Q9H7D0 1870 aa26.41■■□□□ 1.82
TNFRSF25-216ENST00000502588 PRC1O43663 620 aa26.41■■□□□ 1.82
TNFRSF25-216ENST00000502588 HOXA13P31271 388 aaPredicted RBP26.41■■□□□ 1.82
TNFRSF25-216ENST00000502588 BMP2KLQ5H9B9 411 aa26.41■■□□□ 1.82
TNFRSF25-216ENST00000502588 CREB3L3Q68CJ9 461 aa26.41■■□□□ 1.82
TNFRSF25-216ENST00000502588 BUD13Q9BRD0 619 aaKnown RBP eCLIP26.41■■□□□ 1.82
TNFRSF25-216ENST00000502588 ANO2Q9NQ90 1003 aa26.41■■□□□ 1.82
TNFRSF25-216ENST00000502588 CPT1AP50416 773 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 GHRHRQ02643 423 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 NECTIN1Q15223 517 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 LY6KQ17RY6 165 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 ARHGEF16Q5VV41 709 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 CATIPQ7Z7H3 387 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 ZNF654Q8IZM8 581 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 IL31RAQ8NI17 732 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 MAF1Q9H063 256 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 POLR3EQ9NVU0 708 aa26.4■■□□□ 1.82
TNFRSF25-216ENST00000502588 B4DLN1 442 aa26.39■■□□□ 1.82
TNFRSF25-216ENST00000502588 NKRFO15226 690 aaKnown RBP eCLIP26.39■■□□□ 1.82
TNFRSF25-216ENST00000502588 ACRP10323 421 aa26.39■■□□□ 1.82
TNFRSF25-216ENST00000502588 MRPL12P52815 198 aaKnown RBP26.39■■□□□ 1.82
TNFRSF25-216ENST00000502588 TTLL4Q14679 1199 aa26.39■■□□□ 1.82
TNFRSF25-216ENST00000502588 ZFP91Q96JP5 570 aaPredicted RBP26.39■■□□□ 1.82
TNFRSF25-216ENST00000502588 GUCD1Q96NT3 240 aa26.39■■□□□ 1.82
TNFRSF25-216ENST00000502588 TRMT13Q9NUP7 481 aaKnown RBP26.39■■□□□ 1.82
TNFRSF25-216ENST00000502588 TANC1Q9C0D5 1861 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 A6NJR5 290 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 SH2B2O14492 632 aaPredicted RBP26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 NR3C2P08235 984 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 RXRAP19793 462 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 ARHGAP1Q07960 439 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 STXBP2Q15833 593 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 RAB11FIP4Q86YS3 637 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 IWS1Q96ST2 819 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 MTG1Q9BT17 334 aaPredicted RBP26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 LRRC2Q9BYS8 371 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 ALDH8A1Q9H2A2 487 aaPredicted RBP26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 HIPK3Q9H422 1215 aa26.38■■□□□ 1.81
TNFRSF25-216ENST00000502588 TMEM240Q5SV17 173 aa26.37■■□□□ 1.81
TNFRSF25-216ENST00000502588 FAM109BQ6ICB4 259 aaPredicted RBP26.37■■□□□ 1.81
TNFRSF25-216ENST00000502588 AFG1LQ8WV93 481 aa26.37■■□□□ 1.81
TNFRSF25-216ENST00000502588 PDCD2LQ9BRP1 358 aa26.37■■□□□ 1.81
TNFRSF25-216ENST00000502588 NOC4LQ9BVI4 516 aaKnown RBP26.37■■□□□ 1.81
TNFRSF25-216ENST00000502588 WNT8AQ9H1J5 351 aa26.37■■□□□ 1.81
TNFRSF25-216ENST00000502588 PNMA6FA0A0J9YX94 578 aa26.36■■□□□ 1.81
TNFRSF25-216ENST00000502588 RGS20O76081 388 aa26.36■■□□□ 1.81
TNFRSF25-216ENST00000502588 PLEKHA8P1O95397 391 aa26.36■■□□□ 1.81
TNFRSF25-216ENST00000502588 CCL23P55773 120 aa26.36■■□□□ 1.81
TNFRSF25-216ENST00000502588 PPIGQ13427 754 aaKnown RBP eCLIP26.36■■□□□ 1.81
TNFRSF25-216ENST00000502588 NBPF20Q3BBV1 942 aa26.36■■□□□ 1.81
TNFRSF25-216ENST00000502588 CASC1Q6TDU7 716 aa26.36■■□□□ 1.81
TNFRSF25-216ENST00000502588 TRIP12Q14669 1992 aaPredicted RBP26.35■■□□□ 1.81
TNFRSF25-216ENST00000502588 DDAH1O94760 285 aa26.35■■□□□ 1.81
TNFRSF25-216ENST00000502588 CYP2C9P11712 490 aa26.35■■□□□ 1.81
TNFRSF25-216ENST00000502588 MYCLP12524 364 aaPredicted RBP26.35■■□□□ 1.81
TNFRSF25-216ENST00000502588 MCM5P33992 734 aa26.35■■□□□ 1.81
TNFRSF25-216ENST00000502588 SMAD3P84022 425 aaKnown RBP26.35■■□□□ 1.81
TNFRSF25-216ENST00000502588 CMTR1Q8N1G2 835 aaKnown RBP26.35■■□□□ 1.81
TNFRSF25-216ENST00000502588 TMEM199Q8N511 208 aa26.35■■□□□ 1.81
TNFRSF25-216ENST00000502588 TTYH1Q9H313 450 aaPredicted RBP26.35■■□□□ 1.81
TNFRSF25-216ENST00000502588 GH1P01241 217 aa26.34■■□□□ 1.81
TNFRSF25-216ENST00000502588 MMP3P08254 477 aa26.34■■□□□ 1.81
TNFRSF25-216ENST00000502588 PGM5Q15124 567 aa26.34■■□□□ 1.81
TNFRSF25-216ENST00000502588 FAM47CQ5HY64 1035 aa26.34■■□□□ 1.81
TNFRSF25-216ENST00000502588 ZNF365Q70YC5 407 aa26.34■■□□□ 1.81
TNFRSF25-216ENST00000502588 FCHSD1Q86WN1 690 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms