RNA–Protein interactions for RNA: ENST00000502453.1

SUB1-202, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 1 (best)

Gene SUB1, Length 4,273 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-202ENST00000502453 RAC2P15153 192 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 ELF1P32519 619 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 KLF1Q13351 362 aaPredicted RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 PPP2R5BQ15173 497 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 SPATA1Q5VX52 437 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 PEAR1Q5VY43 1037 aaPredicted RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 UNC5AQ6ZN44 842 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 CMTR2Q8IYT2 770 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 MSANTD4Q8NCY6 345 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 RHPN1Q8TCX5 695 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 ISCA1Q9BUE6 129 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 LRRC3Q9BY71 257 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 THG1LQ9NWX6 298 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 ABI2Q9NYB9 513 aaPredicted RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 ARHGAP28Q9P2N2 729 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 RABL2AQ9UBK7 228 aaPredicted RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 FYB1O15117 783 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 OFD1O75665 1012 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 XPAP23025 273 aaPredicted RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 GALNT13Q8IUC8 556 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 LRRN4CLQ8ND94 238 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 C1orf162Q8NEQ5 155 aaPredicted RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 AIFM3Q96NN9 605 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 PPP1R16BQ96T49 567 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 RMDN3Q96TC7 470 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 KATNAL1Q9BW62 490 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 ATP6V0A4Q9HBG4 840 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 DIAPH3Q9NSV4 1193 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 RBM28Q9NW13 759 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 RRP15Q9Y3B9 282 aaKnown RBP4.3□□□□□ -1.72
SUB1-202ENST00000502453 PCDHGB2Q9Y5G2 931 aa4.3□□□□□ -1.72
SUB1-202ENST00000502453 BBOX1O75936 387 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 TP53P04637 393 aaPredicted RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 APOA4P06727 396 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 FSHRP23945 695 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 PSMA3P25788 255 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 IGFALSP35858 605 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 HSD17B7P56937 341 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 DCTN1Q14203 1278 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 PLBD1Q6P4A8 553 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 TLDC1Q6P9B6 456 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 NLRP8Q86W28 1048 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 IQCF2Q8IXL9 164 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 DEPTORQ8TB45 409 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 GIMAP1Q8WWP7 306 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 N4BP2L2Q92802 583 aaPredicted RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 SMARCC1Q92922 1105 aaPredicted RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 DDX11Q96FC9 970 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 DZANK1Q9NVP4 752 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 ITIH6Q6UXX5 1313 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 H0Y3Z8 333 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 NCK2O43639 380 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 HTATSF1O43719 755 aaKnown RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 TBC1D8O95759 1140 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 GNRH1P01148 92 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 IL2RAP01589 272 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 TNNT3P45378 269 aaPredicted RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 HAUS3Q68CZ6 603 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 TRIM68Q6AZZ1 485 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 RTL10Q7L3V2 364 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 LIX1LQ8IVB5 337 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 OR2C3Q8N628 320 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 C19orf47Q8N9M1 422 aaKnown RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 LTV1Q96GA3 475 aaPredicted RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 NECAB3Q96P71 396 aaPredicted RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 AGO4Q9HCK5 861 aaKnown RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 TCF7L1Q9HCS4 588 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 GPR34Q9UPC5 381 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 A0A1B0GVC2 190 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 CDK2AP1O14519 115 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 CPLX1O14810 134 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 TNFSF4P23510 183 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 GRK2P25098 689 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 PEX2P28328 305 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 SUMO1P63165 101 aaKnown RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 TEAD4Q15561 434 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 SPRED3Q2MJR0 410 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 FKBP15Q5T1M5 1219 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 ANKRD45Q5TZF3 282 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 DIEXFQ68CQ4 756 aaKnown RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 CYP26C1Q6V0L0 522 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 CHST15Q7LFX5 561 aaPredicted RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 BRSK2Q8IWQ3 736 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 NBPF15Q8N660 670 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 SCLYQ96I15 445 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 MAGEB10Q96LZ2 347 aaPredicted RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 TM9SF2Q99805 663 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 UNKQ9C0B0 810 aaKnown RBP4.29□□□□□ -1.72
SUB1-202ENST00000502453 PDRG1Q9NUG6 133 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 AASSQ9UDR5 926 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 RASA4BC9J798 803 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 RASA4O43374 803 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 XYLBO75191 536 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 SLC4A1P02730 911 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 EDN3P14138 238 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 BPIP17213 487 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 MUTP22033 750 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 SLC7A5Q01650 507 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 RASIP1Q5U651 963 aa4.29□□□□□ -1.72
SUB1-202ENST00000502453 TDRD10Q5VZ19 366 aaKnown RBP4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms