RNA–Protein interactions for RNA: ENST00000499732.2

NEAT1-201, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 2 BASIC

Gene NEAT1, Length 1,811 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-201ENST00000499732 TCP10L2B9ZVM9 353 aa16.29■□□□□ 0.2
NEAT1-201ENST00000499732 H7C1D1 291 aa16.29■□□□□ 0.2
NEAT1-201ENST00000499732 GYPCP04921 128 aa16.29■□□□□ 0.2
NEAT1-201ENST00000499732 SLC20A2Q08357 652 aa16.29■□□□□ 0.2
NEAT1-201ENST00000499732 WHAMMP3Q1A5X7 153 aa16.29■□□□□ 0.2
NEAT1-201ENST00000499732 NBPF9Q3BBW0 867 aa16.29■□□□□ 0.2
NEAT1-201ENST00000499732 KLHL10Q6JEL2 608 aa16.29■□□□□ 0.2
NEAT1-201ENST00000499732 TNFRSF25Q93038 417 aa16.29■□□□□ 0.2
NEAT1-201ENST00000499732 CCDC17Q96LX7 622 aa16.29■□□□□ 0.2
NEAT1-201ENST00000499732 EIF3JO75822 258 aaKnown RBP16.28■□□□□ 0.2
NEAT1-201ENST00000499732 GOLGA8HP0CJ92 632 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 ATP2B1P20020 1258 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 CASP14P31944 242 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 AFMP43652 599 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 BEND6Q5SZJ8 279 aaPredicted RBP16.28■□□□□ 0.2
NEAT1-201ENST00000499732 HDXQ7Z353 690 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 CLEC10AQ8IUN9 316 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 EPSTI1Q96J88 318 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 LZTS2Q9BRK4 669 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 TRIM34Q9BYJ4 488 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 IRX2Q9BZI1 471 aaPredicted RBP16.28■□□□□ 0.2
NEAT1-201ENST00000499732 GBP3Q9H0R5 595 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 VEZTQ9HBM0 779 aa16.28■□□□□ 0.2
NEAT1-201ENST00000499732 CNTNAP1P78357 1384 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 FAM205CA6NFA0 338 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 LRRC10BA6NIK2 292 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 ITGBL1O95965 494 aaPredicted RBP16.27■□□□□ 0.2
NEAT1-201ENST00000499732 EGFRP00533 1210 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 PARP1P09874 1014 aaKnown RBP16.27■□□□□ 0.2
NEAT1-201ENST00000499732 TNNI2P48788 182 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 STX17P56962 302 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 IRX5P78411 483 aaPredicted RBP16.27■□□□□ 0.2
NEAT1-201ENST00000499732 ATP2C1P98194 919 aaPredicted RBP16.27■□□□□ 0.2
NEAT1-201ENST00000499732 KIF4BQ2VIQ3 1234 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 EARS2Q5JPH6 523 aaKnown RBP16.27■□□□□ 0.2
NEAT1-201ENST00000499732 ZNF569Q5MCW4 686 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 RBM26Q5T8P6 1007 aaKnown RBP16.27■□□□□ 0.2
NEAT1-201ENST00000499732 COL13A1Q5TAT6 717 aaPredicted RBP16.27■□□□□ 0.2
NEAT1-201ENST00000499732 ANKRD20A12PQ8NF67 263 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 NEK11Q8NG66 645 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 NAPGQ99747 312 aaPredicted RBP16.27■□□□□ 0.2
NEAT1-201ENST00000499732 SPZ1Q9BXG8 430 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 GPRC5DQ9NZD1 345 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 RWDD2AQ9UIY3 292 aa16.27■□□□□ 0.2
NEAT1-201ENST00000499732 KLRF2D3W0D1 207 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 TNFAIP1Q13829 316 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 TBC1D10BQ4KMP7 808 aaPredicted RBP16.26■□□□□ 0.19
NEAT1-201ENST00000499732 TATDN1Q6P1N9 297 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 USP17L2Q6R6M4 530 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 CYP26C1Q6V0L0 522 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 SAMD7Q7Z3H4 446 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 TNS4Q8IZW8 715 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 CSRNP1Q96S65 589 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 SH3GLB2Q9NR46 395 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 ABHD10Q9NUJ1 306 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 HERC5Q9UII4 1024 aaKnown RBP16.26■□□□□ 0.19
NEAT1-201ENST00000499732 PCNTO95613 3336 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 FAM196BA6NMK8 535 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 USP17L5A8MUK1 530 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 TTLL1O95922 423 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 PDHBP11177 359 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 TRAPPC10P48553 1259 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 FXR1P51114 621 aaKnown RBP eCLIP16.26■□□□□ 0.19
NEAT1-201ENST00000499732 USP50Q70EL3 339 aaPredicted RBP16.26■□□□□ 0.19
NEAT1-201ENST00000499732 LRRC47Q8N1G4 583 aaKnown RBP16.26■□□□□ 0.19
NEAT1-201ENST00000499732 SLC35F6Q8N357 371 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 IQUBQ8NA54 791 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 GPKOWQ92917 476 aaPredicted RBP eCLIP16.26■□□□□ 0.19
NEAT1-201ENST00000499732 CWC15Q9P013 229 aaKnown RBP16.26■□□□□ 0.19
NEAT1-201ENST00000499732 CTNND2Q9UQB3 1225 aa16.26■□□□□ 0.19
NEAT1-201ENST00000499732 SNHG28P0DPA3 235 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 NLRP5P59047 1200 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 KRT31Q15323 416 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 E2F4Q16254 413 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 TTC38Q5R3I4 469 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 TYW1BQ6NUM6 668 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 GOLGA5Q8TBA6 731 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 CPLX3Q8WVH0 158 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 CPVLQ9H3G5 476 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 RMND1Q9NWS8 449 aa16.25■□□□□ 0.19
NEAT1-201ENST00000499732 PUF60Q9UHX1 559 aaKnown RBP16.25■□□□□ 0.19
NEAT1-201ENST00000499732 CTAGE15A4D2H0 777 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 H3BQF6 201 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 ADAMTS3O15072 1205 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 GTPBP6O43824 516 aaPredicted RBP16.24■□□□□ 0.19
NEAT1-201ENST00000499732 CTAGE8P0CG41 777 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 SMARCA1P28370 1054 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 PAK1Q13153 545 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 NOM1Q5C9Z4 860 aaKnown RBP16.24■□□□□ 0.19
NEAT1-201ENST00000499732 MAP1SQ66K74 1059 aaPredicted RBP16.24■□□□□ 0.19
NEAT1-201ENST00000499732 WWC2Q6AWC2 1192 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 CTAGE6Q86UF2 777 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 CTAGE4Q8IX94 777 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 ZCCHC17Q9NP64 241 aaKnown RBP16.24■□□□□ 0.19
NEAT1-201ENST00000499732 ADAM21Q9UKJ8 722 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 MPHOSPH10O00566 681 aaKnown RBP16.24■□□□□ 0.19
NEAT1-201ENST00000499732 N4BP3O15049 544 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 TBC1D12O60347 775 aa16.24■□□□□ 0.19
NEAT1-201ENST00000499732 COPB1P53618 953 aaKnown RBP16.24■□□□□ 0.19
NEAT1-201ENST00000499732 ERVK-24P63145 666 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms