RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 TRAF1Q13077 416 aa21.32■■□□□ 1
HOXD11-202ENST00000498438 PPP2R5BQ15173 497 aa21.32■■□□□ 1
HOXD11-202ENST00000498438 TSGA10IPQ3SY00 556 aa21.32■■□□□ 1
HOXD11-202ENST00000498438 RAB11FIP4Q86YS3 637 aa21.32■■□□□ 1
HOXD11-202ENST00000498438 SCFD2Q8WU76 684 aa21.32■■□□□ 1
HOXD11-202ENST00000498438 PPP4R2Q9NY27 417 aa21.32■■□□□ 1
HOXD11-202ENST00000498438 SLC12A7Q9Y666 1083 aa21.32■■□□□ 1
HOXD11-202ENST00000498438 A0A0U1RQG5 324 aaPredicted RBP21.31■■□□□ 1
HOXD11-202ENST00000498438 TRIM43BA6NCK2 446 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 PLEKHA8P1O95397 391 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 CALM1P0DP23 149 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 CALM2P0DP24 149 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 CALM3P0DP25 149 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 EIF2AK2P19525 551 aaKnown RBP21.31■■□□□ 1
HOXD11-202ENST00000498438 HOXA13P31271 388 aaPredicted RBP21.31■■□□□ 1
HOXD11-202ENST00000498438 KRT32Q14532 448 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 ARHGEF16Q5VV41 709 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 CXCL17Q6UXB2 119 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 ANKRD33Q7Z3H0 272 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 SGMS1Q86VZ5 419 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 TRIM43Q96BQ3 446 aaPredicted RBP21.31■■□□□ 1
HOXD11-202ENST00000498438 TCEANC2Q96MN5 208 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 IWS1Q96ST2 819 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 PXMP2Q9NR77 195 aa21.31■■□□□ 1
HOXD11-202ENST00000498438 ZEB2O60315 1214 aa21.3■■□□□ 1
HOXD11-202ENST00000498438 CENPBP07199 599 aaPredicted RBP21.3■■□□□ 1
HOXD11-202ENST00000498438 GNAQP50148 359 aa21.3■■□□□ 1
HOXD11-202ENST00000498438 MICU3Q86XE3 530 aa21.3■■□□□ 1
HOXD11-202ENST00000498438 TDHQ8IZJ6 230 aa21.3■■□□□ 1
HOXD11-202ENST00000498438 OR6J1Q8NGC5 347 aa21.3■■□□□ 1
HOXD11-202ENST00000498438 RRP36Q96EU6 259 aaKnown RBP21.3■■□□□ 1
HOXD11-202ENST00000498438 TOX2Q96NM4 488 aa21.3■■□□□ 1
HOXD11-202ENST00000498438 LZTS2Q9BRK4 669 aa21.3■■□□□ 1
HOXD11-202ENST00000498438 SZT2Q5T011 3432 aa21.3■■□□□ 1
HOXD11-202ENST00000498438 DCDC2CA8MYV0 355 aa21.29■■□□□ 1
HOXD11-202ENST00000498438 NKRFO15226 690 aaKnown RBP eCLIP21.29■■□□□ 1
HOXD11-202ENST00000498438 ARIH2O95376 493 aa21.29■■□□□ 1
HOXD11-202ENST00000498438 SMARCA1P28370 1054 aa21.29■■□□□ 1
HOXD11-202ENST00000498438 EXOSC10Q01780 885 aaKnown RBP21.29■■□□□ 1
HOXD11-202ENST00000498438 TTLL4Q14679 1199 aa21.29■■□□□ 1
HOXD11-202ENST00000498438 STXBP2Q15833 593 aa21.29■■□□□ 1
HOXD11-202ENST00000498438 ERICH6BQ5W0A0 696 aa21.29■■□□□ 1
HOXD11-202ENST00000498438 DHX32Q7L7V1 743 aaKnown RBP21.29■■□□□ 1
HOXD11-202ENST00000498438 CMTR1Q8N1G2 835 aaKnown RBP21.29■■□□□ 1
HOXD11-202ENST00000498438 SRBD1Q8N5C6 995 aaKnown RBP21.29■■□□□ 1
HOXD11-202ENST00000498438 SAMD3Q8N6K7 520 aa21.29■■□□□ 1
HOXD11-202ENST00000498438 COPS5Q92905 334 aa21.29■■□□□ 1
HOXD11-202ENST00000498438 MAP3K20Q9NYL2 800 aaKnown RBP21.29■■□□□ 1
HOXD11-202ENST00000498438 SEC63Q9UGP8 760 aaKnown RBP21.29■■□□□ 1
HOXD11-202ENST00000498438 MROH7Q68CQ1 1323 aa21.29■■□□□ 1
HOXD11-202ENST00000498438 GCOM1H8Y6P7 765 aaPredicted RBP21.28■■□□□ 1
HOXD11-202ENST00000498438 ARVCFO00192 962 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 CABYRO75952 493 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 POLR2MP0CAP2 368 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 TXNP10599 105 aaKnown RBP21.28■■□□□ 1
HOXD11-202ENST00000498438 CDK7P50613 346 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 FAAP100Q0VG06 881 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 APOA5Q6Q788 366 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 SEPT14Q6ZU15 432 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 BADQ92934 168 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 KCNB2Q92953 911 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 TMEM39AQ9NV64 488 aa21.28■■□□□ 1
HOXD11-202ENST00000498438 SOX1O00570 391 aaPredicted RBP21.27■■□□□ 1
HOXD11-202ENST00000498438 KIAA0355O15063 1070 aa21.27■■□□□ 1
HOXD11-202ENST00000498438 REC8O95072 547 aa21.27■■□□□ 1
HOXD11-202ENST00000498438 NR3C2P08235 984 aa21.27■■□□□ 1
HOXD11-202ENST00000498438 ITGB8P26012 769 aa21.27■■□□□ 1
HOXD11-202ENST00000498438 HSPA4P34932 840 aa21.27■■□□□ 1
HOXD11-202ENST00000498438 CPT1AP50416 773 aa21.27■■□□□ 1
HOXD11-202ENST00000498438 TMTC3Q6ZXV5 915 aa21.27■■□□□ 1
HOXD11-202ENST00000498438 FANCBQ8NB91 859 aa21.27■■□□□ 1
HOXD11-202ENST00000498438 PDCD2LQ9BRP1 358 aa21.27■■□□□ 1
HOXD11-202ENST00000498438 HMGB1P09429 215 aaKnown RBP21.26■□□□□ 0.99
HOXD11-202ENST00000498438 CCDC62Q6P9F0 684 aa21.26■□□□□ 0.99
HOXD11-202ENST00000498438 SYNE3Q6ZMZ3 975 aa21.26■□□□□ 0.99
HOXD11-202ENST00000498438 FCHSD1Q86WN1 690 aa21.26■□□□□ 0.99
HOXD11-202ENST00000498438 BRPF3Q9ULD4 1205 aa21.26■□□□□ 0.99
HOXD11-202ENST00000498438 SNX14Q9Y5W7 946 aa21.26■□□□□ 0.99
HOXD11-202ENST00000498438 EIF3JO75822 258 aaKnown RBP21.25■□□□□ 0.99
HOXD11-202ENST00000498438 MYL3P08590 195 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 MYCLP12524 364 aaPredicted RBP21.25■□□□□ 0.99
HOXD11-202ENST00000498438 CPA1P15085 419 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 RAG1P15918 1043 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 PSMC6P62333 389 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 PURAQ00577 322 aaKnown RBP21.25■□□□□ 0.99
HOXD11-202ENST00000498438 ITGA7Q13683 1181 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 PGM5Q15124 567 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 LY6KQ17RY6 165 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 FAM126BQ8IXS8 530 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 CCDC82Q8N4S0 544 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 SLC43A3Q8NBI5 491 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 IL31RAQ8NI17 732 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 JAKMIP1Q96N16 626 aaKnown RBP21.25■□□□□ 0.99
HOXD11-202ENST00000498438 POLR3EQ9NVU0 708 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 TBX21Q9UL17 535 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 GRIN2DO15399 1336 aa21.25■□□□□ 0.99
HOXD11-202ENST00000498438 hCG_1642624A0A1W2PR95 340 aa21.24■□□□□ 0.99
HOXD11-202ENST00000498438 BRDTQ58F21 947 aaPredicted RBP21.24■□□□□ 0.99
HOXD11-202ENST00000498438 SCN10AQ9Y5Y9 1956 aa21.24■□□□□ 0.99
HOXD11-202ENST00000498438 KLF18A0A0U1RQI7 1052 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms