RNA–Protein interactions for RNA: ENST00000497892.5

ERCC8-208, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 1 (best)

Gene ERCC8, Length 881 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-208ENST00000497892 FGD1P98174 961 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 CNTN2Q02246 1040 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 C8orf34Q49A92 452 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 SLC30A10Q6XR72 485 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 SYNE3Q6ZMZ3 975 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 Q6ZUG5 572 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 TMTC3Q6ZXV5 915 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 RUFY3Q7L099 469 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 HOMER1Q86YM7 354 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 RAB11FIP4Q86YS3 637 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 CCDC144CPQ8IYA2 1237 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 FANCBQ8NB91 859 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 RGS22Q8NE09 1264 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 BRF1Q92994 677 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 PIGSQ96S52 555 aa13.04□□□□□ -0.32
ERCC8-208ENST00000497892 PNMA6FA0A0J9YX94 578 aa13.03□□□□□ -0.32
ERCC8-208ENST00000497892 SOWAHBA6NEL2 793 aa13.03□□□□□ -0.32
ERCC8-208ENST00000497892 EVI5O60447 810 aa13.03□□□□□ -0.32
ERCC8-208ENST00000497892 GHRHRQ02643 423 aa13.03□□□□□ -0.32
ERCC8-208ENST00000497892 TRAF1Q13077 416 aa13.03□□□□□ -0.32
ERCC8-208ENST00000497892 BAATQ14032 418 aaPredicted RBP13.03□□□□□ -0.32
ERCC8-208ENST00000497892 RNF207Q6ZRF8 634 aa13.03□□□□□ -0.32
ERCC8-208ENST00000497892 SRBD1Q8N5C6 995 aaKnown RBP13.03□□□□□ -0.32
ERCC8-208ENST00000497892 IL17RAQ96F46 866 aa13.03□□□□□ -0.32
ERCC8-208ENST00000497892 RBM28Q9NW13 759 aaKnown RBP13.03□□□□□ -0.32
ERCC8-208ENST00000497892 CNPY2Q9Y2B0 182 aa13.03□□□□□ -0.32
ERCC8-208ENST00000497892 CYP46A1Q9Y6A2 500 aa13.03□□□□□ -0.32
ERCC8-208ENST00000497892 TNRC18O15417 2968 aaPredicted RBP13.02□□□□□ -0.32
ERCC8-208ENST00000497892 PTPDC1A2A3K4 754 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 GOLGA8BA8MQT2 603 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 OPLAHO14841 1288 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 SEPT4O43236 478 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 MSCO60682 206 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 SNAI1O95863 264 aaPredicted RBP13.02□□□□□ -0.33
ERCC8-208ENST00000497892 EVCP57679 992 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 RPS6P62753 249 aaKnown RBP13.02□□□□□ -0.33
ERCC8-208ENST00000497892 APOBRQ0VD83 1088 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 RTN1Q16799 776 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 PRAMEF19Q5SWL8 479 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 ARMCX2Q7L311 632 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 MCF2L2Q86YR7 1114 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 CMTR1Q8N1G2 835 aaKnown RBP13.02□□□□□ -0.33
ERCC8-208ENST00000497892 RRP36Q96EU6 259 aaKnown RBP13.02□□□□□ -0.33
ERCC8-208ENST00000497892 UPF3BQ9BZI7 483 aaKnown RBP13.02□□□□□ -0.33
ERCC8-208ENST00000497892 ADD3Q9UEY8 706 aaKnown RBP13.02□□□□□ -0.33
ERCC8-208ENST00000497892 DDX20Q9UHI6 824 aaKnown RBP13.02□□□□□ -0.33
ERCC8-208ENST00000497892 OGDHLQ9ULD0 1010 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 MRPL11Q9Y3B7 192 aaKnown RBP13.02□□□□□ -0.33
ERCC8-208ENST00000497892 PCDHA1Q9Y5I3 950 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 CNTNAP5Q8WYK1 1306 aa13.02□□□□□ -0.33
ERCC8-208ENST00000497892 PDE4DIPQ5VU43 2346 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 LOC102724159A0A0B4J2E5 919 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 ASB14A6NK59 587 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 GOLGA8AA7E2F4 631 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 ZNF865P0CJ78 1059 aaPredicted RBP13.01□□□□□ -0.33
ERCC8-208ENST00000497892 CALML3P27482 149 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 CNGA1P29973 690 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 MLLT1Q03111 559 aaPredicted RBP13.01□□□□□ -0.33
ERCC8-208ENST00000497892 TOB2Q14106 344 aaPredicted RBP13.01□□□□□ -0.33
ERCC8-208ENST00000497892 PWP2Q15269 919 aaKnown RBP13.01□□□□□ -0.33
ERCC8-208ENST00000497892 UBE2Q1Q7Z7E8 422 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 ANKLE1Q8NAG6 615 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 MORC4Q8TE76 937 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 PURBQ96QR8 312 aaKnown RBP13.01□□□□□ -0.33
ERCC8-208ENST00000497892 KATNBL1Q9H079 304 aa13.01□□□□□ -0.33
ERCC8-208ENST00000497892 FAM217BQ9NTX9 383 aaPredicted RBP13.01□□□□□ -0.33
ERCC8-208ENST00000497892 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.01□□□□□ -0.33
ERCC8-208ENST00000497892 SEC63Q9UGP8 760 aaKnown RBP13.01□□□□□ -0.33
ERCC8-208ENST00000497892 TFRCP02786 760 aaKnown RBP13□□□□□ -0.33
ERCC8-208ENST00000497892 METAP2P50579 478 aaKnown RBP eCLIP13□□□□□ -0.33
ERCC8-208ENST00000497892 ALDH5A1P51649 535 aaPredicted RBP13□□□□□ -0.33
ERCC8-208ENST00000497892 HSD17B4P51659 736 aa13□□□□□ -0.33
ERCC8-208ENST00000497892 FUT2Q10981 343 aa13□□□□□ -0.33
ERCC8-208ENST00000497892 PPP2R5BQ15173 497 aa13□□□□□ -0.33
ERCC8-208ENST00000497892 DNERQ8NFT8 737 aa13□□□□□ -0.33
ERCC8-208ENST00000497892 SYTL5Q8TDW5 730 aaPredicted RBP13□□□□□ -0.33
ERCC8-208ENST00000497892 PIBF1Q8WXW3 757 aa13□□□□□ -0.33
ERCC8-208ENST00000497892 ABHD16BQ9H3Z7 469 aa13□□□□□ -0.33
ERCC8-208ENST00000497892 NAP1L2Q9ULW6 460 aaPredicted RBP13□□□□□ -0.33
ERCC8-208ENST00000497892 GTF3C3Q9Y5Q9 886 aa13□□□□□ -0.33
ERCC8-208ENST00000497892 CCDC196A0A1B0GTZ2 297 aa12.99□□□□□ -0.33
ERCC8-208ENST00000497892 FARP2O94887 1054 aaPredicted RBP12.99□□□□□ -0.33
ERCC8-208ENST00000497892 AKR1A1P14550 325 aa12.99□□□□□ -0.33
ERCC8-208ENST00000497892 EDNRBP24530 442 aa12.99□□□□□ -0.33
ERCC8-208ENST00000497892 CDC27P30260 824 aa12.99□□□□□ -0.33
ERCC8-208ENST00000497892 ACVR2BQ13705 512 aa12.99□□□□□ -0.33
ERCC8-208ENST00000497892 TBC1D5Q92609 795 aa12.99□□□□□ -0.33
ERCC8-208ENST00000497892 PDRG1Q9NUG6 133 aa12.99□□□□□ -0.33
ERCC8-208ENST00000497892 MAP3K20Q9NYL2 800 aaKnown RBP12.99□□□□□ -0.33
ERCC8-208ENST00000497892 COL20A1Q9P218 1284 aa12.99□□□□□ -0.33
ERCC8-208ENST00000497892 ZHX1Q9UKY1 873 aaPredicted RBP12.99□□□□□ -0.33
ERCC8-208ENST00000497892 DDX49Q9Y6V7 483 aaKnown RBP12.99□□□□□ -0.33
ERCC8-208ENST00000497892 CFBP00751 764 aa12.98□□□□□ -0.33
ERCC8-208ENST00000497892 PDIA3P30101 505 aaKnown RBP12.98□□□□□ -0.33
ERCC8-208ENST00000497892 CCDC82Q8N4S0 544 aa12.98□□□□□ -0.33
ERCC8-208ENST00000497892 SAMD3Q8N6K7 520 aa12.98□□□□□ -0.33
ERCC8-208ENST00000497892 MPHOSPH6Q99547 160 aaKnown RBP12.98□□□□□ -0.33
ERCC8-208ENST00000497892 VTA1Q9NP79 307 aa12.98□□□□□ -0.33
ERCC8-208ENST00000497892 HCSTQ9UBK5 93 aa12.98□□□□□ -0.33
ERCC8-208ENST00000497892 KIAA1217Q5T5P2 1943 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms