RNA–Protein interactions for RNA: ENST00000497663.1

TNRC18-210, Transcript of trinucleotide repeat containing 18, humanhuman

TSL 2

Gene TNRC18, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18-210ENST00000497663 YTHDC1Q96MU7 727 aaKnown RBP17.92■□□□□ 0.46
TNRC18-210ENST00000497663 TTYH1Q9H313 450 aaPredicted RBP17.92■□□□□ 0.46
TNRC18-210ENST00000497663 PDGFCQ9NRA1 345 aa17.92■□□□□ 0.46
TNRC18-210ENST00000497663 CTDP1Q9Y5B0 961 aaPredicted RBP17.92■□□□□ 0.46
TNRC18-210ENST00000497663 DUSP11O75319 330 aaKnown RBP17.91■□□□□ 0.46
TNRC18-210ENST00000497663 SLC3A2P08195 630 aaKnown RBP17.91■□□□□ 0.46
TNRC18-210ENST00000497663 ALAS1P13196 640 aa17.91■□□□□ 0.46
TNRC18-210ENST00000497663 RCSD1Q6JBY9 416 aa17.91■□□□□ 0.46
TNRC18-210ENST00000497663 B4GALNT3Q6L9W6 998 aa17.91■□□□□ 0.46
TNRC18-210ENST00000497663 IL27Q8NEV9 243 aa17.91■□□□□ 0.46
TNRC18-210ENST00000497663 TRERF1Q96PN7 1200 aa17.91■□□□□ 0.46
TNRC18-210ENST00000497663 ACAD9Q9H845 621 aa17.91■□□□□ 0.46
TNRC18-210ENST00000497663 STARD7Q9NQZ5 370 aa17.91■□□□□ 0.46
TNRC18-210ENST00000497663 FRMPD2Q68DX3 1309 aaPredicted RBP17.91■□□□□ 0.46
TNRC18-210ENST00000497663 DLL1O00548 723 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 ORC4O43929 436 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 ASGR1P07306 291 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 C6orf222P0C671 652 aaPredicted RBP17.9■□□□□ 0.46
TNRC18-210ENST00000497663 HSPD1P10809 573 aaKnown RBP17.9■□□□□ 0.46
TNRC18-210ENST00000497663 IKQ13123 557 aaPredicted RBP17.9■□□□□ 0.46
TNRC18-210ENST00000497663 ALX1Q15699 326 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 RRP12Q5JTH9 1297 aaKnown RBP17.9■□□□□ 0.46
TNRC18-210ENST00000497663 FAM109BQ6ICB4 259 aaPredicted RBP17.9■□□□□ 0.46
TNRC18-210ENST00000497663 EEPD1Q7L9B9 569 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 ANKRD33Q7Z3H0 272 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 TBC1D10CQ8IV04 446 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 TMEM47Q9BQJ4 181 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 TSEN34Q9BSV6 310 aaKnown RBP17.9■□□□□ 0.46
TNRC18-210ENST00000497663 UPF3AQ9H1J1 476 aaKnown RBP17.9■□□□□ 0.46
TNRC18-210ENST00000497663 HELLSQ9NRZ9 838 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 TMEM39AQ9NV64 488 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 PRUNE2Q8WUY3 3088 aa17.9■□□□□ 0.46
TNRC18-210ENST00000497663 HOXA2O43364 376 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 CDK7P50613 346 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 GJA9P57773 515 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 MCMDC2Q4G0Z9 681 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 C16orf59Q7L2K0 433 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 FAM160B2Q86V87 743 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 ABHD16BQ9H3Z7 469 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 CYP39A1Q9NYL5 469 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 FBXO40Q9UH90 709 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 TBX21Q9UL17 535 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 LCTP09848 1927 aa17.89■□□□□ 0.45
TNRC18-210ENST00000497663 SPTBN5Q9NRC6 3674 aaKnown RBP17.89■□□□□ 0.45
TNRC18-210ENST00000497663 SMPD1P17405 629 aa17.88■□□□□ 0.45
TNRC18-210ENST00000497663 CST5P28325 142 aaPredicted RBP17.88■□□□□ 0.45
TNRC18-210ENST00000497663 CCDC96Q2M329 555 aa17.88■□□□□ 0.45
TNRC18-210ENST00000497663 PUS10Q3MIT2 529 aaKnown RBP17.88■□□□□ 0.45
TNRC18-210ENST00000497663 TAPT1Q6NXT6 567 aa17.88■□□□□ 0.45
TNRC18-210ENST00000497663 FBXO16Q8IX29 292 aaPredicted RBP17.88■□□□□ 0.45
TNRC18-210ENST00000497663 CHURC1Q8WUH1 139 aa17.88■□□□□ 0.45
TNRC18-210ENST00000497663 CDX2Q99626 313 aaPredicted RBP17.88■□□□□ 0.45
TNRC18-210ENST00000497663 CPVLQ9H3G5 476 aa17.88■□□□□ 0.45
TNRC18-210ENST00000497663 SEMA6BQ9H3T3 888 aa17.88■□□□□ 0.45
TNRC18-210ENST00000497663 GNEQ9Y223 722 aaKnown RBP17.88■□□□□ 0.45
TNRC18-210ENST00000497663 GRIN2DO15399 1336 aa17.88■□□□□ 0.45
TNRC18-210ENST00000497663 MOXD2PA6NHM9 499 aa17.87■□□□□ 0.45
TNRC18-210ENST00000497663 NFIBO00712 420 aa17.87■□□□□ 0.45
TNRC18-210ENST00000497663 PLA2G6O60733 806 aa17.87■□□□□ 0.45
TNRC18-210ENST00000497663 RAG1P15918 1043 aa17.87■□□□□ 0.45
TNRC18-210ENST00000497663 GNASQ5JWF2 1037 aa17.87■□□□□ 0.45
TNRC18-210ENST00000497663 EXOC6Q8TAG9 804 aa17.87■□□□□ 0.45
TNRC18-210ENST00000497663 RANBP17Q9H2T7 1088 aaKnown RBP17.87■□□□□ 0.45
TNRC18-210ENST00000497663 TOMM22Q9NS69 142 aa17.87■□□□□ 0.45
TNRC18-210ENST00000497663 LRRC37A2A6NM11 1700 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 COPS2P61201 443 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 TNFAIP2Q03169 654 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 BLOC1S3Q6QNY0 202 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 CXCL17Q6UXB2 119 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 NSMFQ6X4W1 530 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 PLEKHM2Q8IWE5 1019 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 SMC5Q8IY18 1101 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 RILPL2Q969X0 211 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 TOX2Q96NM4 488 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 ZKSCAN3Q9BRR0 538 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 IL25Q9H293 177 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 CCPG1Q9ULG6 757 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 NEDD4P46934 1319 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 UMODL1Q5DID0 1318 aa17.86■□□□□ 0.45
TNRC18-210ENST00000497663 GRXCR1A8MXD5 290 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 NR1I2O75469 434 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 ACRP10323 421 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 PSMC6P62333 389 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 FPGSQ05932 587 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 BAATQ14032 418 aaPredicted RBP17.85■□□□□ 0.45
TNRC18-210ENST00000497663 ZNF697Q5TEC3 545 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 SYDE2Q5VT97 1194 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 CCDC171Q6TFL3 1326 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 BTNL9Q6UXG8 535 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 FAM126BQ8IXS8 530 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 PPP1R13LQ8WUF5 828 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 NUP133Q8WUM0 1156 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 DCAF4Q8WV16 495 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 CLEC4DQ8WXI8 215 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 MYLIPQ8WY64 445 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 RNPC3Q96LT9 517 aaKnown RBP17.85■□□□□ 0.45
TNRC18-210ENST00000497663 MTRQ99707 1265 aa17.85■□□□□ 0.45
TNRC18-210ENST00000497663 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.85■□□□□ 0.451e-12■□□□□ 9.1
TNRC18-210ENST00000497663 ELP1O95163 1332 aa17.84■□□□□ 0.45
TNRC18-210ENST00000497663 ARVCFO00192 962 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms