RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SNAP23O00161 211 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 CAND2O75155 1236 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 TRIM37O94972 964 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 SLC1A4P43007 532 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 SLC8A3P57103 927 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 SLC4A8Q2Y0W8 1093 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 FERMT2Q96AC1 680 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 PAGR1Q9BTK6 254 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 GOPCQ9HD26 462 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 MAP3K15Q6ZN16 1313 aa14.41□□□□□ -0.1
GAPVD1-220ENST00000497580 MEA1Q16626 185 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 UHMK1Q8TAS1 419 aaKnown RBP14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 ELAC2Q9BQ52 826 aaKnown RBP14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 AP1M1Q9BXS5 423 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 GOLPH3Q9H4A6 298 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 ARMT1Q9H993 441 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 PANK4Q9NVE7 773 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 TBX22Q9Y458 520 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 EPHB6O15197 1021 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 PALMO75781 387 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 PSMD2Q13200 908 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 XRCC4Q13426 336 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 METTL24Q5JXM2 366 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 ANKS4BQ8N8V4 417 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 CWC25Q9NXE8 425 aaPredicted RBP14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 FBXL5Q9UKA1 691 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 PXDNQ92626 1479 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 PDS5AQ29RF7 1337 aaKnown RBP14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 WDR17Q8IZU2 1322 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 A0A1W2PQC6 194 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 PRKAB2O43741 272 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 MGRN1O60291 552 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 MBD4O95243 580 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 SRGNP10124 158 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 ZNF654Q8IZM8 581 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 FANCBQ8NB91 859 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 ZNF507Q8TCN5 953 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 CCDC47Q96A33 483 aaKnown RBP14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 DPH5Q9H2P9 285 aa14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 TAF1DQ9H5J8 278 aaPredicted RBP14.4□□□□□ -0.1
GAPVD1-220ENST00000497580 EEF1GP26641 437 aaKnown RBP14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 ADCY2Q08462 1091 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 NBPF20Q3BBV1 942 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 NBPF9Q3BBW0 867 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 SPICE1Q8N0Z3 855 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 TAF4BQ92750 862 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 SLC52A2Q9HAB3 445 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 GDF3Q9NR23 364 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 CNNM1Q9NRU3 951 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 NOP53Q9NZM5 478 aaKnown RBP14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 STK36Q9NRP7 1315 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 MCAMP43121 646 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 SGMS1Q86VZ5 419 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 WHAMMQ8TF30 809 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 HPS3Q969F9 1004 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 PURBQ96QR8 312 aaKnown RBP14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 ZCWPW1Q9H0M4 648 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 PIH1D3Q9NQM4 214 aaKnown RBP14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 SNUPNO95149 360 aaKnown RBP14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 ZNF844Q08AG5 666 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 BYSLQ13895 437 aaKnown RBP14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 RUFY4Q6ZNE9 571 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 KRT28Q7Z3Y7 464 aa14.39□□□□□ -0.11
GAPVD1-220ENST00000497580 MYH13Q9UKX3 1938 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 WDR19Q8NEZ3 1342 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 KLHL33A6NCF5 533 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 RASSF10A6NK89 507 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 CCT8L1PA6NM43 557 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 LRRC53A6NM62 1247 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 A8MUI8 341 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 KCNK3O14649 394 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 CEP104O60308 925 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 EVI5O60447 810 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 KLHDC7AQ5VTJ3 777 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 ADSSL1Q8N142 457 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 CCDC26Q8TAB7 109 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 CCT6BQ92526 530 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 LPIN2Q92539 896 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 KCNJ2P63252 427 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 TNNC1P63316 161 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 TATDN2Q93075 761 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 ZNF570Q96NI8 536 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 PNMA2Q9UL42 364 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 ADD2P35612 726 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 SSR1P43307 286 aaKnown RBP14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 NLRP5P59047 1200 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 ERVK-9P63128 1117 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 PDXDC2PQ6P474 469 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 CHMP6Q96FZ7 201 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 SLC12A6Q9UHW9 1150 aa14.38□□□□□ -0.11
GAPVD1-220ENST00000497580 FMN2Q9NZ56 1722 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 PLEKHA8P1O95397 391 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 FLT3P36888 993 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 MAP3K12Q12852 859 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 MIGA1Q8NAN2 632 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 GPR108Q9NPR9 543 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 SAMD15Q9P1V8 674 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 LIFRP42702 1097 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 RWDD2BP57060 319 aa14.37□□□□□ -0.11
GAPVD1-220ENST00000497580 DNAAF5Q86Y56 855 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms