RNA–Protein interactions for RNA: ENST00000497018.1

UBR4-217, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 183 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-217ENST00000497018 TIMMDC1Q9NPL8 285 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 SMYD2Q9NRG4 433 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 RASSF1Q9NS23 344 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 EVLQ9UI08 416 aaPredicted RBP2.33□□□□□ -2.04
UBR4-217ENST00000497018 ADAM30Q9UKF2 790 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 HDAC9Q9UKV0 1011 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 SNCAIPQ9Y6H5 919 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 BCL9LQ86UU0 1499 aa2.33□□□□□ -2.04
UBR4-217ENST00000497018 KDM5BQ9UGL1 1544 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 LRP6O75581 1613 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ABCA5Q8WWZ7 1642 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 SHPRHQ149N8 1683 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ADGBQ8N7X0 1667 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 WDR90Q96KV7 1748 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 A0A1W2PRQ8 180 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 FAM177BA6PVY3 158 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ZBTB42B2RXF5 422 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 B4E1Z4 1266 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 M0R3H8 397 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ARVCFO00192 962 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 TRAF5O00463 557 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 TCERG1O14776 1098 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 RGS13O14921 159 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 NCAM2O15394 837 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 DDX3YO15523 660 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 ANP32CO43423 234 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 H2AFYO75367 372 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 ULK1O75385 1050 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 CRTAMO95727 393 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 RPN1P04843 607 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 CKMP06732 381 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 BMP2P12643 396 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 VEGFAP15692 232 aaPredicted RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 RAG1P15918 1043 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ATP2A2P16615 1042 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 VCAM1P19320 739 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 AKAP5P24588 427 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 FLT3P36888 993 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 SCNN1BP51168 640 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 SESN3P58005 492 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 MPP1Q00013 466 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 HNRNPUQ00839 825 aaKnown RBP eCLIP2.32□□□□□ -2.04
UBR4-217ENST00000497018 RING1Q06587 406 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 LRRC32Q14392 662 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ZNF267Q14586 743 aaPredicted RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 EFHC2Q5JST6 749 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 DGKKQ5KSL6 1271 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 INTS11Q5TA45 600 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 SPRYD7Q5W111 196 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 SLC6A19Q695T7 634 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 STYK1Q6J9G0 422 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 CC2D1AQ6P1N0 951 aaPredicted RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 LILRA6Q6PI73 481 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 SYDE1Q6ZW31 735 aaPredicted RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 DHX32Q7L7V1 743 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 LYSMD3Q7Z3D4 306 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 MAATS1Q7Z4T9 603 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 TBC1D1Q86TI0 1168 aaPredicted RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 ZNF598Q86UK7 904 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 SKAP1Q86WV1 359 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 KIAA0319LQ8IZA0 1049 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 KRT78Q8N1N4 520 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 TTC30BQ8N4P2 665 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 OR2C3Q8N628 320 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ZBTB34Q8NCN2 500 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 NAXEQ8NCW5 288 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 BVESQ8NE79 360 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 DIS3LQ8TF46 1054 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 BTN2A2Q8WVV5 523 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 NELL1Q92832 810 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 SMARCC1Q92922 1105 aaPredicted RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 GCC1Q96CN9 775 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 AHCYL2Q96HN2 611 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 TNIP3Q96KP6 325 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 TEKT5Q96M29 485 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 PNMA5Q96PV4 448 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 FAM193BQ96PV7 902 aaPredicted RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 LRRC27Q9C0I9 530 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ADAM19Q9H013 955 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 CBX8Q9HC52 389 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ALG13Q9NP73 1137 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 RIC8AQ9NPQ8 531 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 CYP26B1Q9NR63 512 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 KRT82Q9NSB4 513 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 SPTLC3Q9NUV7 552 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 C14orf119Q9NWQ9 140 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 B4GALT6Q9UBX8 382 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 KCNG1Q9UIX4 513 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 NOL7Q9UMY1 257 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 EMC9Q9Y3B6 208 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 TRAF6Q9Y4K3 522 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 PCDHGC5Q9Y5F6 944 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 LRRFIP2Q9Y608 721 aaKnown RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 USP19O94966 1318 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 SPATA31A6Q5VVP1 1343 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 BLMP54132 1417 aaPredicted RBP2.32□□□□□ -2.04
UBR4-217ENST00000497018 FGD5Q6ZNL6 1462 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 ZFYVE16Q7Z3T8 1539 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 VWDEQ8N2E2 1590 aa2.32□□□□□ -2.04
UBR4-217ENST00000497018 MYO3AQ8NEV4 1616 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms