RNA–Protein interactions for RNA: ENST00000496896.1

TRIM4-205, Transcript of tripartite motif containing 4, humanhuman

TSL 5

Gene TRIM4, Length 601 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-205ENST00000496896 IRF2BPLQ9H1B7 796 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 CLEC1BQ9P126 229 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 LRP2BPQ9P2M1 347 aa6.76□□□□□ -1.33
TRIM4-205ENST00000496896 TACR1P25103 407 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 CAP1Q01518 475 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 RAB33AQ14088 237 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 SLC9A5Q14940 896 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 TARBP2Q15633 366 aaKnown RBP6.75□□□□□ -1.33
TRIM4-205ENST00000496896 SLC10A6Q3KNW5 377 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 NAALADL2Q58DX5 795 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 PEX11GQ96HA9 241 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 SGSM3Q96HU1 749 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 GPRC5CQ9NQ84 441 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 NUDT5Q9UKK9 219 aa6.75□□□□□ -1.33
TRIM4-205ENST00000496896 F8W031 263 aaPredicted RBP6.74□□□□□ -1.33
TRIM4-205ENST00000496896 PPP1R11O60927 126 aaPredicted RBP6.74□□□□□ -1.33
TRIM4-205ENST00000496896 PFKLP17858 780 aa6.74□□□□□ -1.33
TRIM4-205ENST00000496896 BMP7P18075 431 aa6.74□□□□□ -1.33
TRIM4-205ENST00000496896 IGFBP6P24592 240 aaPredicted RBP6.74□□□□□ -1.33
TRIM4-205ENST00000496896 KCNAB2Q13303 367 aa6.74□□□□□ -1.33
TRIM4-205ENST00000496896 SSPNQ14714 243 aa6.74□□□□□ -1.33
TRIM4-205ENST00000496896 Q8N1Y9 231 aa6.74□□□□□ -1.33
TRIM4-205ENST00000496896 CELF2-AS1Q8N7Q2 184 aa6.74□□□□□ -1.33
TRIM4-205ENST00000496896 ST13P5Q8NFI4 369 aaPredicted RBP6.74□□□□□ -1.33
TRIM4-205ENST00000496896 ZNF669Q96BR6 464 aaPredicted RBP6.74□□□□□ -1.33
TRIM4-205ENST00000496896 GULP1Q9UBP9 304 aa6.74□□□□□ -1.33
TRIM4-205ENST00000496896 RWDD3Q9Y3V2 267 aa6.74□□□□□ -1.33
TRIM4-205ENST00000496896 TBX1O43435 398 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 ZBTB7AO95365 584 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 SNRPB2P08579 225 aaKnown RBP6.73□□□□□ -1.33
TRIM4-205ENST00000496896 GTF2A2P52657 109 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 GFRA1P56159 465 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 PRR5P85299 388 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 ZNF200P98182 395 aaPredicted RBP6.73□□□□□ -1.33
TRIM4-205ENST00000496896 NFIXQ14938 502 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 TCERG1LQ5VWI1 586 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 NBPF6Q5VWK0 638 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 MBLAC2Q68D91 279 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 WWC2Q6AWC2 1192 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 KREMEN2Q8NCW0 462 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 DACT3Q96B18 629 aaPredicted RBP6.73□□□□□ -1.33
TRIM4-205ENST00000496896 ARMC5Q96C12 935 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 NBPF4Q96M43 638 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 LGR4Q9BXB1 951 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 FBLN5Q9UBX5 448 aa6.73□□□□□ -1.33
TRIM4-205ENST00000496896 IQCA1LA6NCM1 817 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 PI3P19957 117 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 MAP4K2Q12851 820 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 FAM129CQ86XR2 697 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 RIOX2Q8IUF8 465 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 TMEFF1Q8IYR6 380 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 PLEKHO2Q8TD55 490 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 DPF3Q92784 378 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 DIO2Q92813 273 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 C1orf159Q96HA4 380 aa6.72□□□□□ -1.33
TRIM4-205ENST00000496896 EPB41L4AQ9HCS5 686 aaPredicted RBP6.72□□□□□ -1.33
TRIM4-205ENST00000496896 DBR1Q9UK59 544 aaKnown RBP6.72□□□□□ -1.33
TRIM4-205ENST00000496896 A0A1W2PQU0 124 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 ZC3H12DA2A288 527 aaKnown RBP6.71□□□□□ -1.34
TRIM4-205ENST00000496896 MEFVO15553 781 aaPredicted RBP6.71□□□□□ -1.34
TRIM4-205ENST00000496896 BUB1BO60566 1050 aaPredicted RBP6.71□□□□□ -1.34
TRIM4-205ENST00000496896 STK10O94804 968 aaKnown RBP6.71□□□□□ -1.34
TRIM4-205ENST00000496896 NCAM1P13591 858 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 PPP2R2AP63151 447 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 INF2Q27J81 1249 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 SLC35F1Q5T1Q4 408 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 DCP2Q8IU60 420 aaKnown RBP6.71□□□□□ -1.34
TRIM4-205ENST00000496896 CCDC103Q8IW40 242 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 CKAP2LQ8IYA6 745 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 USP33Q8TEY7 942 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 CPA5Q8WXQ8 436 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 MSRB2Q9Y3D2 182 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 TIMM13Q9Y5L4 95 aaPredicted RBP6.71□□□□□ -1.34
TRIM4-205ENST00000496896 NPFFR2Q9Y5X5 522 aa6.71□□□□□ -1.34
TRIM4-205ENST00000496896 MYO1BO43795 1136 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 FUCA1P04066 466 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 LTBRP36941 435 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 SLC6A11P48066 632 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 KRTAP10-2P60368 255 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 RPL11P62913 178 aaKnown RBP6.7□□□□□ -1.34
TRIM4-205ENST00000496896 MROH9Q5TGP6 573 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 CNKSR3Q6P9H4 555 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 GGNQ86UU5 652 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 NLGN1Q8N2Q7 840 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 BORCS6Q96GS4 357 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 KCNC2Q96PR1 638 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 TRIM55Q9BYV6 548 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 ST7Q9NRC1 585 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 HCFC2Q9Y5Z7 792 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 X6R8D5 127 aa6.7□□□□□ -1.34
TRIM4-205ENST00000496896 ARNTLO00327 626 aa6.69□□□□□ -1.34
TRIM4-205ENST00000496896 NTRK1P04629 796 aa6.69□□□□□ -1.34
TRIM4-205ENST00000496896 ASGR2P07307 311 aa6.69□□□□□ -1.34
TRIM4-205ENST00000496896 ATP2B1P20020 1258 aa6.69□□□□□ -1.34
TRIM4-205ENST00000496896 ECI1P42126 302 aa6.69□□□□□ -1.34
TRIM4-205ENST00000496896 AFF3P51826 1226 aaKnown RBP6.69□□□□□ -1.34
TRIM4-205ENST00000496896 HSP90AA2PQ14568 343 aaPredicted RBP6.69□□□□□ -1.34
TRIM4-205ENST00000496896 PRRT2Q7Z6L0 340 aaPredicted RBP6.69□□□□□ -1.34
TRIM4-205ENST00000496896 PPIL6Q8IXY8 311 aa6.69□□□□□ -1.34
TRIM4-205ENST00000496896 TMEM145Q8NBT3 493 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms