RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 FAM109BQ6ICB4 259 aaPredicted RBP16.63■□□□□ 0.25
VTI1A-209ENST00000496445 RALYLQ86SE5 291 aaKnown RBP16.63■□□□□ 0.25
VTI1A-209ENST00000496445 OR6J1Q8NGC5 347 aa16.63■□□□□ 0.25
VTI1A-209ENST00000496445 NCOA7Q8NI08 942 aa16.63■□□□□ 0.25
VTI1A-209ENST00000496445 RNPC3Q96LT9 517 aaKnown RBP16.63■□□□□ 0.25
VTI1A-209ENST00000496445 GUCD1Q96NT3 240 aa16.63■□□□□ 0.25
VTI1A-209ENST00000496445 MPHOSPH6Q99547 160 aaKnown RBP16.63■□□□□ 0.25
VTI1A-209ENST00000496445 PPP1R12CQ9BZL4 782 aa16.63■□□□□ 0.25
VTI1A-209ENST00000496445 MRPL11Q9Y3B7 192 aaKnown RBP16.63■□□□□ 0.25
VTI1A-209ENST00000496445 VCANP13611 3396 aa16.63■□□□□ 0.25
VTI1A-209ENST00000496445 GBF1Q92538 1859 aa16.63■□□□□ 0.25
VTI1A-209ENST00000496445 ZBTB5O15062 677 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 B4GALT4O60513 344 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 GHRHRQ02643 423 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 TROAPQ12815 778 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 COL9A3Q14050 684 aaPredicted RBP16.62■□□□□ 0.25
VTI1A-209ENST00000496445 WTAPQ15007 396 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 C16orf59Q7L2K0 433 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 MCF2L2Q86YR7 1114 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 SCFD2Q8WU76 684 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 AMNQ9BXJ7 453 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 LSG1Q9H089 658 aaKnown RBP16.62■□□□□ 0.25
VTI1A-209ENST00000496445 TRPV6Q9H1D0 765 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 PRUNE2Q8WUY3 3088 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 UMODL1Q5DID0 1318 aa16.62■□□□□ 0.25
VTI1A-209ENST00000496445 NKRFO15226 690 aaKnown RBP eCLIP16.61■□□□□ 0.25
VTI1A-209ENST00000496445 CYTH3O43739 400 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 CSF2RAP15509 400 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 CYP2C18P33260 490 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 CPT1AP50416 773 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 HSD17B4P51659 736 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 SMAD3P84022 425 aaKnown RBP16.61■□□□□ 0.25
VTI1A-209ENST00000496445 NSUN6Q8TEA1 469 aaKnown RBP16.61■□□□□ 0.25
VTI1A-209ENST00000496445 FAM161BQ96MY7 647 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 RMDN3Q96TC7 470 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.61■□□□□ 0.257e-9■■□□□ 12.4
VTI1A-209ENST00000496445 RIOX1Q9H6W3 641 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 POLR3EQ9NVU0 708 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 STXBP5LQ9Y2K9 1186 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 SCN5AQ14524 2016 aa16.61■□□□□ 0.25
VTI1A-209ENST00000496445 MYH7BA7E2Y1 1941 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 CFBP00751 764 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 MYL3P08590 195 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 TXNP10599 105 aaKnown RBP16.6■□□□□ 0.25
VTI1A-209ENST00000496445 EIF2AK2P19525 551 aaKnown RBP16.6■□□□□ 0.25
VTI1A-209ENST00000496445 PPIGQ13427 754 aaKnown RBP eCLIP16.6■□□□□ 0.252e-7■■■■□ 19.6
VTI1A-209ENST00000496445 TTLL4Q14679 1199 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 TMEM67Q5HYA8 995 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 TMEM240Q5SV17 173 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 ZNF697Q5TEC3 545 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 CCDC62Q6P9F0 684 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 HOMER1Q86YM7 354 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 IGDCC4Q8TDY8 1250 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 PIGSQ96S52 555 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 ESYT1Q9BSJ8 1104 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 NOC4LQ9BVI4 516 aaKnown RBP16.6■□□□□ 0.25
VTI1A-209ENST00000496445 SEZ6LQ9BYH1 1024 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 ALDH8A1Q9H2A2 487 aaPredicted RBP16.6■□□□□ 0.25
VTI1A-209ENST00000496445 LY9Q9HBG7 655 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 GPHNQ9NQX3 736 aaPredicted RBP16.6■□□□□ 0.25
VTI1A-209ENST00000496445 PXMP2Q9NR77 195 aa16.6■□□□□ 0.25
VTI1A-209ENST00000496445 ERICH2A1L162 156 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 A6NJR5 290 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 B4DLN1 442 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 MRPL12P52815 198 aaKnown RBP16.59■□□□□ 0.25
VTI1A-209ENST00000496445 SART3Q15020 963 aaKnown RBP16.59■□□□□ 0.25
VTI1A-209ENST00000496445 SEPT14Q6ZU15 432 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 TMEM199Q8N511 208 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 PPP1R13LQ8WUF5 828 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 IWS1Q96ST2 819 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 MTG1Q9BT17 334 aaPredicted RBP16.59■□□□□ 0.25
VTI1A-209ENST00000496445 WNT8AQ9H1J5 351 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 TTYH1Q9H313 450 aaPredicted RBP16.59■□□□□ 0.25
VTI1A-209ENST00000496445 HIPK3Q9H422 1215 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 TRMT13Q9NUP7 481 aaKnown RBP16.59■□□□□ 0.25
VTI1A-209ENST00000496445 CHD7Q9P2D1 2997 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 PCDHA1Q9Y5I3 950 aa16.59■□□□□ 0.25
VTI1A-209ENST00000496445 SLC27A2O14975 620 aa16.58■□□□□ 0.24
VTI1A-209ENST00000496445 ACRP10323 421 aa16.58■□□□□ 0.24
VTI1A-209ENST00000496445 ARHGAP1Q07960 439 aa16.58■□□□□ 0.24
VTI1A-209ENST00000496445 STXBP2Q15833 593 aa16.58■□□□□ 0.24
VTI1A-209ENST00000496445 LY6KQ17RY6 165 aa16.58■□□□□ 0.24
VTI1A-209ENST00000496445 RASIP1Q5U651 963 aa16.58■□□□□ 0.24
VTI1A-209ENST00000496445 ARHGEF16Q5VV41 709 aa16.58■□□□□ 0.24
VTI1A-209ENST00000496445 CENPQQ7L2Z9 268 aaPredicted RBP16.58■□□□□ 0.24
VTI1A-209ENST00000496445 MYL10Q9BUA6 226 aa16.58■□□□□ 0.24
VTI1A-209ENST00000496445 DOCK5Q9H7D0 1870 aa16.57■□□□□ 0.24
VTI1A-209ENST00000496445 MMP3P08254 477 aa16.57■□□□□ 0.24
VTI1A-209ENST00000496445 HOXA13P31271 388 aaPredicted RBP16.57■□□□□ 0.24
VTI1A-209ENST00000496445 NBPF20Q3BBV1 942 aa16.57■□□□□ 0.24
VTI1A-209ENST00000496445 BMP2KLQ5H9B9 411 aa16.57■□□□□ 0.24
VTI1A-209ENST00000496445 PSRC1Q6PGN9 363 aaPredicted RBP16.57■□□□□ 0.24
VTI1A-209ENST00000496445 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
VTI1A-209ENST00000496445 ZNF654Q8IZM8 581 aa16.57■□□□□ 0.24
VTI1A-209ENST00000496445 IL31RAQ8NI17 732 aa16.57■□□□□ 0.24
VTI1A-209ENST00000496445 VWCEQ96DN2 955 aa16.57■□□□□ 0.24
VTI1A-209ENST00000496445 IL23AQ9NPF7 189 aa16.57■□□□□ 0.24
VTI1A-209ENST00000496445 SH2B2O14492 632 aaPredicted RBP16.56■□□□□ 0.24
VTI1A-209ENST00000496445 PRC1O43663 620 aa16.56■□□□□ 0.24
VTI1A-209ENST00000496445 RGS20O76081 388 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms